Factsheet for TraesCS7A01G551400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	golgi, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G538000.1	Wheat	golgi	85.66	81.64
HORVU7Hr1G121570.1	Barley	endoplasmic reticulum	79.92	77.08
GSMUA_Achr8P09280_001	Banana	cytosol	7.38	37.5
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	43.44	31.27
TraesCS2A01G318200.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.08	28.95
Zm00001d003499_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	44.26	27.84
TraesCS3A01G051000.1	Wheat	vacuole	37.3	27.49
KXG26428	Sorghum	plasma membrane	44.26	26.6
TraesCS2A01G501100.1	Wheat	plastid	17.21	21.32
TraesCS5A01G248100.1	Wheat	plasma membrane	31.15	19.14
TraesCS1A01G192600.1	Wheat	plastid	16.39	18.96
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	30.33	18.23
KRH13267	Soybean	plasma membrane	11.89	17.79
TraesCS3A01G459700.1	Wheat	vacuole	22.54	16.08
KRH38505	Soybean	plasma membrane, vacuole	17.21	14.74
TraesCS4A01G404600.1	Wheat	plasma membrane	21.31	14.65
TraesCS6A01G315600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.18	14.57
TraesCS7A01G176700.1	Wheat	golgi	24.59	14.46
TraesCS4A01G104900.1	Wheat	mitochondrion	22.13	13.95
TraesCS1A01G444900.1	Wheat	golgi, plasma membrane	17.21	10.69

Protein Annotations

EnsemblPlants:TraesCS7A01G551400.1	EnsemblPlantsGene:TraesCS7A01G551400	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF454	PFAM:PF13639	PFscan:PS50089	SEG:seg
SMART:SM00184	SUPFAM:SSF57850	TIGR:cd16454	TMHMM:TMhelix	MapMan:19.2.2.1.5.3.3	:

Description

No Description!

Coordinates

chr7A:-:725034073..725034807

Molecular Weight (calculated)

26346.8 Da

IEP (calculated)

6.848

GRAVY (calculated)

-0.104

Length

244 amino acids

Sequence
(BLAST)

001: MVMVQHLVAV GRDVVFRGPH TLTPRPTPSA GTSTPKSTVI SVVICALFFL VGLCGYINRY CRRVNTAAAA PVGGRDRSSS SGGSSRKRGL EQSVLATFPV
101: MLWRGHHKKE KTVMEEEEEE ERCPVCLAAF EEGDNLRLLP HCSHVFHPEC VDPWLQARAT CPLCRANLEL PLPADALAIA MPAEGSDDDV DDGKEEAMEL
201: EMLRTERRAA RLPPVATGKL ALPSPVARIA ERVSASSVGV VGPS

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.