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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G315800.1 Wheat golgi 95.26 97.05
TraesCS2B01G336300.1 Wheat extracellular, golgi, plasma membrane 95.53 95.53
TraesCS3A01G051000.1 Wheat vacuole 56.05 64.35
TraesCS7A01G551400.1 Wheat golgi, plastid 28.95 45.08
GSMUA_Achr8P09280_001 Banana cytosol 5.53 43.75
TraesCS5A01G248100.1 Wheat plasma membrane 38.16 36.52
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 32.63 30.54
TraesCS3A01G459700.1 Wheat vacuole 26.84 29.82
TraesCS7A01G176700.1 Wheat golgi 32.11 29.4
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.32 29.38
KRH38505 Soybean plasma membrane, vacuole 21.05 28.07
TraesCS4A01G404600.1 Wheat plasma membrane 26.05 27.89
KRH13267 Soybean plasma membrane 11.05 25.77
TraesCS1A01G192600.1 Wheat plastid 14.21 25.59
TraesCS4A01G104900.1 Wheat mitochondrion 25.53 25.06
TraesCS2A01G501100.1 Wheat plastid 12.63 24.37
TraesCS1A01G444900.1 Wheat golgi, plasma membrane 18.16 17.56
Protein Annotations
EnsemblPlants:TraesCS2A01G318200.1EnsemblPlantsGene:TraesCS2A01G318200Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDncoils:CoilPANTHER:PTHR14155PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089
SEG:segSignalP:SignalP-TMSMART:SM00184SUPFAM:SSF57850TIGR:cd16454TMHMM:TMhelix
MapMan:19.2.2.1.5.3.3:::::
Description
No Description!
Coordinates
chr2A:+:543308151..543309293
Molecular Weight (calculated)
40661.5 Da
IEP (calculated)
8.903
GRAVY (calculated)
-0.340
Length
380 amino acids
Sequence
(BLAST)
001: MVAAMEVRPH LLLVLLCLLG AGAGSCVAQT LPPAPVPQSG AAAAPRPTPF GRTMSTVITV AISVFFFLLF FCAYINQCRL AENAAPQGAA AAAAGAGASR
101: RGKRGLDPAV VATFPIMQYR EIKEHKIGRG VLECAVCLTA FEEADDLRLL PHCSHAFHPE CIDPWLEARI TCPLCRANLE KPPPPPQPSA VAPPSPEQVA
201: RRQPSPSPSP PHAVAIPVRE EEEESDEDDR KEEAMELEML RSERRAARLP RSHSTGHSLF AASAAAAERS DHERFTLRLP HHVREQVLRS RRLRHATSLI
301: DFAGASPEGS VRGGRPAGGG GSSHGGRRWQ AFLARTMSWA RGGGDGSVRK GWDGSTRRGR DDAESSRKGA ASPAPAPARP
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.