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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G304400.1 Wheat plasma membrane 96.06 96.06
TraesCS4D01G302600.1 Wheat plasma membrane 95.49 95.49
HORVU4Hr1G078260.1 Barley plasma membrane 92.96 92.44
Os03t0188200-01 Rice golgi 69.01 69.41
EER92732 Sorghum golgi 63.1 60.87
Zm00001d027983_P001 Maize plasma membrane, plastid 59.72 58.56
Zm00001d048230_P001 Maize golgi 61.41 57.37
AT4G09100.1 Thale cress extracellular 12.96 34.85
GSMUA_Achr3P20400_001 Banana mitochondrion 30.42 31.4
CDX75097 Canola extracellular 12.11 31.16
Bra038386.1-P Field mustard extracellular 11.83 30.43
CDY48058 Canola extracellular 11.83 30.43
GSMUA_AchrUn_... Banana golgi, plasma membrane 29.86 30.03
CDY53236 Canola plasma membrane 28.73 29.39
CDX82175 Canola extracellular 18.87 28.63
Bra010641.1-P Field mustard extracellular, golgi 24.79 28.57
CDX90377 Canola extracellular, golgi 24.79 28.57
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 26.76 28.27
CDY39477 Canola extracellular 24.23 27.74
TraesCS5A01G248100.1 Wheat plasma membrane 30.99 27.71
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.66 27.63
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 23.66 27.63
KRH33975 Soybean golgi, plasma membrane, vacuole 27.61 27.3
KRG96857 Soybean vacuole 28.73 27.2
KRH68588 Soybean plasma membrane 27.89 27.05
TraesCS3A01G051000.1 Wheat vacuole 25.07 26.89
CDY18787 Canola plasma membrane 29.3 26.87
Bra040642.1-P Field mustard plasma membrane 28.73 26.42
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 27.32 26.36
CDY25038 Canola plasma membrane 27.32 26.22
CDX99986 Canola plasma membrane 25.63 26.07
TraesCS2A01G318200.1 Wheat endoplasmic reticulum, golgi, vacuole 27.89 26.05
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 24.51 26.05
CDX86163 Canola plasma membrane 21.97 26.0
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 25.63 26.0
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 29.58 25.86
CDX80653 Canola plasma membrane 21.97 25.74
Bra036631.1-P Field mustard plasma membrane 25.35 25.71
AT3G05200.1 Thale cress plasma membrane 28.73 25.63
TraesCS1A01G192600.1 Wheat plastid 15.21 25.59
Bra009962.1-P Field mustard mitochondrion, plastid 20.28 25.17
KRH72413 Soybean cytosol, golgi, vacuole 26.48 25.13
CDY05577 Canola plasma membrane 27.04 25.13
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 28.17 25.13
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 22.82 25.08
Bra020591.1-P Field mustard plasma membrane 26.76 24.93
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 27.89 24.87
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 25.63 24.73
CDY31657 Canola extracellular, plasma membrane, plastid 25.63 24.73
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 23.66 24.71
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.76 24.61
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 24.79 24.51
CDX82176 Canola extracellular 25.07 24.38
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 25.92 24.34
TraesCS4A01G104900.1 Wheat mitochondrion 26.48 24.29
CDY70284 Canola plasma membrane 26.48 24.16
PGSC0003DMT400073575 Potato extracellular, plasma membrane 29.3 24.02
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 25.63 24.01
AT1G72200.1 Thale cress plasma membrane 27.32 24.01
Bra012330.1-P Field mustard golgi, plasma membrane 23.1 23.84
TraesCS3A01G459700.1 Wheat vacuole 22.82 23.68
Bra040855.1-P Field mustard golgi, plasma membrane 25.07 23.67
CDY21367 Canola golgi, plasma membrane 25.07 23.67
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 24.51 23.64
CDY05049 Canola plasma membrane 19.44 23.63
TraesCS7A01G176700.1 Wheat golgi 27.61 23.61
CDY62007 Canola golgi, plasma membrane 24.79 23.4
Bra005375.1-P Field mustard cytosol, nucleus, plastid 20.56 23.32
CDX84270 Canola cytosol, plastid, vacuole 20.56 23.32
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 20.56 23.32
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.48 23.21
AT4G09120.1 Thale cress plasma membrane 22.54 23.19
CDX82179 Canola plasma membrane 22.82 23.08
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 19.44 22.85
TraesCS2A01G501100.1 Wheat plastid 12.68 22.84
Bra008016.1-P Field mustard plasma membrane 25.92 22.83
CDY03651 Canola plasma membrane 25.92 22.83
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 26.48 22.38
AT1G22500.1 Thale cress plasma membrane 23.94 22.31
Solyc12g087860.1.1 Tomato vacuole 23.1 21.98
PGSC0003DMT400045807 Potato plasma membrane 23.38 21.96
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 21.97 21.85
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 20.85 21.83
CDX90713 Canola extracellular, golgi, plasma membrane 20.85 21.83
Bra008015.1-P Field mustard plasma membrane 24.23 21.72
CDY03652 Canola plasma membrane 24.23 21.72
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 24.23 21.61
AT2G34990.2 Thale cress plasma membrane 19.72 21.6
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 23.66 21.37
TraesCS7A01G551400.1 Wheat golgi, plastid 14.65 21.31
AT1G35330.1 Thale cress endoplasmic reticulum 19.44 21.04
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 23.1 20.97
KRH72412 Soybean nucleus, plasma membrane, plastid 22.25 20.47
KRH16794 Soybean plasma membrane 22.25 20.15
CDY12022 Canola plasma membrane 19.44 19.55
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 19.15 19.54
Bra028075.1-P Field mustard plasma membrane 18.87 18.98
CDY03116 Canola plasma membrane 18.59 18.7
CDY70750 Canola extracellular, mitochondrion, nucleus 14.65 17.16
CDY12527 Canola extracellular, plasma membrane, vacuole 10.7 15.97
CDY27787 Canola extracellular, plasma membrane, vacuole 13.24 15.61
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 10.42 15.55
CDY05145 Canola plasma membrane 12.96 15.49
TraesCS1A01G444900.1 Wheat golgi, plasma membrane 16.9 15.27
CDY50446 Canola mitochondrion 7.89 11.72
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538
InterPro:IPR001841InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF298
SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixEnsemblPlantsGene:TraesCS4A01G404600EnsemblPlants:TraesCS4A01G404600.1
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDTIGR:cd16454SEG:seg::
Description
No Description!
Coordinates
chr4A:-:678132834..678133901
Molecular Weight (calculated)
38633.4 Da
IEP (calculated)
6.088
GRAVY (calculated)
-0.325
Length
355 amino acids
Sequence
(BLAST)
001: MARGQITSLL LFLLLSSTAL PCLAQQSNST GHTRSSRTAG GFSPTTVVVL VVLIAAFVVL TLFSIYINRC TGGHPVPRRP YRSTVPDQPV DAAAHSDRCR
101: PRGLDKEVVE AFPTAVYGDV KARMATNKSG PLECAVCLTE FEDSDELRVL PACCHVFHPE CIDPWLAGAV TCPLCRADLT EPPAIPAAAE SRGYLTDTAV
201: QEEPEELDEE CSVVSFTAES LTSFSTVWRH EFTGAEYNHY RRTQSAMDAP DRHTLRLPEH VMKELAAVRR HRRAASLAAE YPDTADQKTP GWLTSFLRSM
301: SWQRQSRGDS DAGEEHGGSK RIHPVAGAPV EKPSGSGSGG DEKKESSDVD ALNRV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.