Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G007990.1 | Barley | cytosol | 24.77 | 92.13 |
| TraesCS3D01G050600.1 | Wheat | plasma membrane | 91.54 | 86.82 |
| TraesCS2A01G318200.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 64.35 | 56.05 |
| GSMUA_Achr8P09280_001 | Banana | cytosol | 7.25 | 50.0 |
| TraesCS3B01G060000.1 | Wheat | mitochondrion | 31.12 | 44.21 |
| TraesCS7A01G551400.1 | Wheat | golgi, plastid | 27.49 | 37.3 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 36.25 | 30.23 |
| TraesCS1A01G192600.1 | Wheat | plastid | 17.52 | 27.49 |
| TraesCS3A01G459700.1 | Wheat | vacuole | 27.49 | 26.61 |
| TraesCS7A01G176700.1 | Wheat | golgi | 32.63 | 26.02 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.42 | 25.68 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 31.12 | 25.37 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 26.89 | 25.07 |
| KRH38505 | Soybean | plasma membrane, vacuole | 20.85 | 24.21 |
| KRH13267 | Soybean | plasma membrane | 11.78 | 23.93 |
| TraesCS2A01G501100.1 | Wheat | plastid | 13.9 | 23.35 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 26.28 | 22.48 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 20.24 | 17.05 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G051000.1 | EnsemblPlantsGene:TraesCS3A01G051000 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | PFAM:PF13639 | PFscan:PS50089 |
| SEG:seg | SignalP:SignalP-TM | SMART:SM00184 | SUPFAM:SSF57850 | TIGR:cd16454 | TMHMM:TMhelix |
| MapMan:19.2.2.1.5.3.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:27543275..27545018
Molecular Weight (calculated)
35823.1 Da
IEP (calculated)
7.963
GRAVY (calculated)
-0.277
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVRAHLLVV LCILVAGTST AQLLPPRGPA PQMKPPPFGR AMTMIITVVA VAIGVLFLLL FFCAYVTQCR LVEDHGAPQE GSVAPGGVSR RGKRGLDPAV
101: VATFPIVPYR EIKEHKIGSG ALECAVCLTE FEDADDLRLL PHCSHAFHPD CIDPWLQTRT TCPLCRANLE KPPPPAAAPA PSSPPHAVVA MPVQQGEQKE
201: DSDKDDRKEE AAELEKLRRE RRAARLLRSH STGHSAEQCD CEDHERFTLR LPQHVREEVL SRCCARPSVE SLSGGGCGVG ERGGSFRDAG GASSGERRWQ
301: TLLARTMPWA RAGSTRKVRD DVAASTTAAR P
101: VATFPIVPYR EIKEHKIGSG ALECAVCLTE FEDADDLRLL PHCSHAFHPD CIDPWLQTRT TCPLCRANLE KPPPPAAAPA PSSPPHAVVA MPVQQGEQKE
201: DSDKDDRKEE AAELEKLRRE RRAARLLRSH STGHSAEQCD CEDHERFTLR LPQHVREEVL SRCCARPSVE SLSGGGCGVG ERGGSFRDAG GASSGERRWQ
301: TLLARTMPWA RAGSTRKVRD DVAASTTAAR P
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.