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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G501500.1 Wheat plastid 97.97 97.97
TraesCS2B01G529100.1 Wheat plastid 96.95 96.95
Zm00001d026494_P001 Maize plastid 57.36 55.66
OQU82489 Sorghum plasma membrane, vacuole 54.31 45.15
TraesCS1A01G192600.1 Wheat plastid 27.41 25.59
CDY31686 Canola nucleus 12.69 23.81
TraesCS7A01G551400.1 Wheat golgi, plastid 21.32 17.21
TraesCS5A01G248100.1 Wheat plasma membrane 29.44 14.61
TraesCS4A01G104900.1 Wheat mitochondrion 28.43 14.47
TraesCS3A01G459700.1 Wheat vacuole 24.37 14.04
TraesCS3A01G051000.1 Wheat vacuole 23.35 13.9
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 28.43 13.79
TraesCS1A01G444900.1 Wheat golgi, plasma membrane 25.89 12.98
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.4 12.84
TraesCS4A01G404600.1 Wheat plasma membrane 22.84 12.68
TraesCS2A01G318200.1 Wheat endoplasmic reticulum, golgi, vacuole 24.37 12.63
TraesCS7A01G176700.1 Wheat golgi 24.87 11.81
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:TraesCS2A01G501100.1EnsemblPlantsGene:TraesCS2A01G501100Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF78PFAM:PF13639PFscan:PS50089SEG:seg
SMART:SM00184SUPFAM:SSF57850TIGR:cd16454TMHMM:TMhelixMapMan:19.2.2.1.5.3.3:
Description
No Description!
Coordinates
chr2A:+:729580854..729581447
Molecular Weight (calculated)
20591.0 Da
IEP (calculated)
7.684
GRAVY (calculated)
0.234
Length
197 amino acids
Sequence
(BLAST)
001: MMAMPSSASS TPAADVLGVP PPLPPPPGAD VSVIVGVLTG VLLGLFLFLI YAKHCRQRGA RGAAGRLGLG FRASSTCDRC RSGLSLSVVD ALPVVRFGDM
101: GGAAAAAQPE CAVCLGSFDA AADELLRVLP KCRHAFHAGC VDTWLEAHST CPVCRRRVGK EDAFAVIPKL EAGADHGDAE WYPAREAEMQ IVVRRPA
Best Arabidopsis Sequence Match ( AT2G20030.1 )
(BLAST)
001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
Arabidopsis Description
ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.