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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G501100.1 Wheat plastid 97.97 97.97
TraesCS2B01G529100.1 Wheat plastid 95.94 95.94
Zm00001d026494_P001 Maize plastid 57.36 55.66
OQU82489 Sorghum plasma membrane, vacuole 53.81 44.73
CDY31686 Canola nucleus 12.69 23.81
TraesCS7D01G537300.1 Wheat golgi, nucleus, plasma membrane 20.81 19.25
TraesCS7D01G538000.1 Wheat golgi 21.32 16.41
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 30.96 15.56
TraesCS5D01G446700.1 Wheat golgi 24.87 14.5
TraesCS3D01G050600.1 Wheat plasma membrane 25.38 14.33
TraesCS3D01G495500.1 Wheat vacuole 27.92 14.25
TraesCS3D01G452500.1 Wheat golgi, plasma membrane, vacuole 24.87 14.16
TraesCS6D01G113000.1 Wheat golgi 28.43 13.97
TraesCS7D01G420000.1 Wheat plastid 28.43 13.97
TraesCS2D01G315800.1 Wheat golgi 25.38 13.4
TraesCS4D01G200100.1 Wheat plastid 27.92 13.29
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.89 12.59
TraesCS4D01G302600.1 Wheat plasma membrane 22.34 12.39
TraesCS7D01G178000.1 Wheat golgi 24.87 12.01
TraesCS1D01G453000.1 Wheat extracellular, plasma membrane 26.4 11.98
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:TraesCS2D01G501500.1EnsemblPlantsGene:TraesCS2D01G501500Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF78PFAM:PF13639PFscan:PS50089SEG:seg
SMART:SM00184SUPFAM:SSF57850TIGR:cd16454TMHMM:TMhelixMapMan:19.2.2.1.5.3.3:
Description
No Description!
Coordinates
chr2D:+:595556938..595557531
Molecular Weight (calculated)
20633.1 Da
IEP (calculated)
7.684
GRAVY (calculated)
0.243
Length
197 amino acids
Sequence
(BLAST)
001: MMAMPSSASS TPAADVLGVP PPLPPPPGTD VSVLVGVLTG VLLGLFLFLI YAKHCRQRGA RGAAGRLGLG FRASSTCDRC RSGLSLSVVD ALPVVRFGDM
101: GGAAAAAQPE CAVCLGAFDA AADELLRVLP KCRHAFHAGC VDTWLEAHST CPVCRRRVGK EDAFAVIPKL EAGVDHGDAE WYPAREAEMQ IVVRRPA
Best Arabidopsis Sequence Match ( AT2G20030.1 )
(BLAST)
001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
Arabidopsis Description
ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.