Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18787 Canola plasma membrane 97.41 87.34
Bra040642.1-P Field mustard plasma membrane 96.83 87.05
AT3G05200.1 Thale cress plasma membrane 82.42 71.86
CDY27787 Canola extracellular, plasma membrane, vacuole 57.35 66.11
CDY05145 Canola plasma membrane 55.33 64.65
CDX99986 Canola plasma membrane 60.81 60.46
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 60.81 60.29
CDY25038 Canola plasma membrane 62.54 58.65
CDY05577 Canola plasma membrane 63.4 57.59
CDY70750 Canola extracellular, mitochondrion, nucleus 48.41 55.45
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 45.24 51.64
CDX80653 Canola plasma membrane 44.38 50.83
CDX86163 Canola plasma membrane 43.23 50.0
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 42.65 44.05
KRH33975 Soybean golgi, plasma membrane, vacuole 44.38 42.9
KRG96857 Soybean vacuole 42.94 39.73
KRH68588 Soybean plasma membrane 40.63 38.52
CDX75097 Canola extracellular 14.99 37.68
CDY48058 Canola extracellular 14.99 37.68
GSMUA_AchrUn_... Banana golgi, plasma membrane 37.75 37.11
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 36.6 36.81
CDX90377 Canola extracellular, golgi 32.56 36.69
CDY39477 Canola extracellular 32.56 36.45
Zm00001d005936_P001 Maize plasma membrane 40.92 36.13
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 31.7 36.07
GSMUA_Achr6P30500_001 Banana plasma membrane 30.26 35.96
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 40.35 35.71
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 42.94 35.48
CDX82175 Canola extracellular 23.92 35.47
HORVU5Hr1G069980.1 Barley plasma membrane 39.19 35.42
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 36.31 35.2
GSMUA_Achr3P20400_001 Banana mitochondrion 34.87 35.17
Os09t0468300-00 Rice golgi, plasma membrane 38.9 34.88
TraesCS5B01G245800.1 Wheat plasma membrane 39.77 34.85
TraesCS5A01G248100.1 Wheat plasma membrane 39.77 34.76
GSMUA_Achr10P... Banana plasma membrane 38.62 34.54
CDY31686 Canola nucleus 10.37 34.29
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 37.75 33.76
Zm00001d020789_P001 Maize plasma membrane 38.04 33.17
EER99041 Sorghum endoplasmic reticulum, plasma membrane 39.19 33.01
CDY31657 Canola extracellular, plasma membrane, plastid 33.72 31.79
TraesCS6D01G113000.1 Wheat golgi 36.6 31.67
CDY05049 Canola plasma membrane 26.51 31.51
GSMUA_AchrUn_... Banana plastid 32.56 31.39
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 33.14 31.25
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 36.31 31.19
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 36.31 31.19
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 36.31 31.03
TraesCS3D01G495500.1 Wheat vacuole 34.01 30.57
TraesCS3B01G549900.1 Wheat vacuole 27.67 30.48
CDY62007 Canola golgi, plasma membrane 32.85 30.32
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 18.44 30.19
CDY70284 Canola plasma membrane 33.72 30.08
CDY21367 Canola golgi, plasma membrane 32.56 30.05
EES18560 Sorghum golgi, plasma membrane 34.01 30.03
Os08t0484200-01 Rice golgi 35.73 30.02
Zm00001d031261_P001 Maize golgi 32.56 29.97
CDY03651 Canola plasma membrane 34.58 29.78
HORVU4Hr1G078260.1 Barley plasma membrane 30.26 29.41
CDX84270 Canola cytosol, plastid, vacuole 26.51 29.39
CDX82176 Canola extracellular 30.84 29.32
CDX90713 Canola extracellular, golgi, plasma membrane 28.53 29.2
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 26.22 29.07
CDX82179 Canola plasma membrane 29.39 29.06
CDX78812 Canola plasma membrane 24.5 28.91
CDY44502 Canola plasma membrane 24.5 28.91
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 11.82 28.87
TraesCS4A01G404600.1 Wheat plasma membrane 29.39 28.73
TraesCS4B01G304400.1 Wheat plasma membrane 29.39 28.73
Os03t0188200-01 Rice golgi 29.11 28.61
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 23.63 28.57
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 23.63 28.57
TraesCS4D01G302600.1 Wheat plasma membrane 29.11 28.45
CDY12022 Canola plasma membrane 28.82 28.33
CDY03202 Canola plasma membrane 22.77 28.11
CDY35174 Canola plasma membrane 22.77 28.11
HORVU4Hr1G080840.1 Barley cytosol 19.02 27.85
CDY03116 Canola plasma membrane 28.24 27.76
CDY01502 Canola plasma membrane 23.63 27.61
CDY03652 Canola plasma membrane 31.41 27.53
EER92732 Sorghum golgi 28.82 27.17
TraesCS4A01G104900.1 Wheat mitochondrion 29.68 26.61
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 32.28 26.6
CDY05713 Canola extracellular 11.24 26.53
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 31.12 26.02
Zm00001d018122_P001 Maize vacuole 31.41 26.01
CDY62419 Canola cytosol 11.24 26.0
Zm00001d029395_P001 Maize plasma membrane, plastid 28.53 25.85
HORVU4Hr1G057610.1 Barley plastid 30.55 25.73
TraesCS4D01G200100.1 Wheat plastid 30.55 25.6
OQU85775 Sorghum golgi, plasma membrane, vacuole 31.12 25.53
Zm00001d027983_P001 Maize plasma membrane, plastid 26.51 25.41
Zm00001d048230_P001 Maize golgi 27.67 25.26
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 31.7 24.89
TraesCS7B01G081700.1 Wheat golgi 29.39 24.64
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.53 24.63
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 27.38 24.55
TraesCS7D01G178000.1 Wheat golgi 28.82 24.51
TraesCS7A01G176700.1 Wheat golgi 29.11 24.34
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 30.55 24.26
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.24 24.2
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.95 23.95
TraesCS4B01G199100.1 Wheat plastid 30.26 23.49
HORVU6Hr1G077610.1 Barley plasma membrane 27.38 23.4
Os03t0391100-00 Rice endoplasmic reticulum, golgi 28.82 22.99
CDY12527 Canola extracellular, plasma membrane, vacuole 14.7 21.43
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 25.36 21.15
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 14.41 21.01
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 32.28 20.55
CDY13888 Canola plasma membrane 20.46 19.19
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 20.46 18.54
CDY06859 Canola endoplasmic reticulum, plasma membrane 21.9 18.23
CDY35230 Canola endoplasmic reticulum, plasma membrane 21.9 18.23
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 21.33 18.14
CDX98867 Canola endoplasmic reticulum, golgi 18.44 18.13
CDY66475 Canola endoplasmic reticulum, plasma membrane 21.33 18.09
CDY50446 Canola mitochondrion 12.39 17.99
CDY50930 Canola endoplasmic reticulum, plasma membrane 21.61 17.86
CDX92900 Canola endoplasmic reticulum, plasma membrane 21.33 17.83
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 19.02 17.79
CDX70126 Canola plasma membrane 19.88 17.12
CDX90435 Canola nucleus 23.63 13.36
CDY05714 Canola cytosol 5.19 8.45
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:A0A078ITT5UniProt:A0A078ITT5EnsemblPlants:CDY53236ProteinID:CDY53236
ProteinID:CDY53236.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00010253001InterPro:IPR001841
InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF414SMART:SM00184
SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EE65CDInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
BnaCnng24690DBnaCnng24690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITT5]
Coordinates
chrLK033178:+:72764..73921
Molecular Weight (calculated)
37970.2 Da
IEP (calculated)
9.392
GRAVY (calculated)
-0.307
Length
347 amino acids
Sequence
(BLAST)
001: MRRSDPLTFS GVLPIVFLLI LSAAELAAGQ GPPPPDNRNE MYNNYGRVSP ALAVIVVILV AALFFMGFFS IYFRTCSGVA DPGASPAAGG VRSRGTVTAA
101: SRGLDLSVVE TFPTFVYSEV KTQKLGKGEL ECAICLNEFE DDETLRLLPK CDHVFHPHCI DAWLEAHVTC PVCRANLSEG EPVEPDVELQ QFSRSHTTGH
201: SVVQPGECTD RFTLRLPEDV RKRVMENWRL NRSGSLVALP RGGSSRRGKP SRARSDRWLF RKTPSFMWRG RDDGSIRLGS TRSIRANVSN STGESTRSDR
301: WAFLRNGSLL WRNSSVHKGG VNKDGEGTSV KPTGTGGSTS GSMRLPV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.