Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G17920.1 | Thale cress | plasma membrane | 79.12 | 81.31 |
| CDY44502 | Canola | plasma membrane | 79.8 | 80.61 |
| CDX78812 | Canola | plasma membrane | 79.12 | 79.93 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 54.55 | 56.45 |
| CDY03202 | Canola | plasma membrane | 52.86 | 55.87 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 53.54 | 55.4 |
| CDY35174 | Canola | plasma membrane | 51.85 | 54.8 |
| CDX90435 | Canola | nucleus | 96.63 | 46.74 |
| Bra012630.1-P | Field mustard | nucleus | 96.3 | 46.2 |
| Solyc08g005110.1.1 | Tomato | plastid | 37.71 | 40.88 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 38.38 | 39.58 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 38.05 | 36.69 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 36.7 | 35.28 |
| CDY31686 | Canola | nucleus | 12.12 | 34.29 |
| Solyc08g076800.2.1 | Tomato | plastid | 32.66 | 34.28 |
| CDY48058 | Canola | extracellular | 14.14 | 30.43 |
| CDX75097 | Canola | extracellular | 13.8 | 29.71 |
| CDX90377 | Canola | extracellular, golgi | 25.59 | 24.68 |
| CDY62419 | Canola | cytosol | 12.46 | 24.67 |
| CDY39477 | Canola | extracellular | 25.59 | 24.52 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.92 | 24.34 |
| CDY53236 | Canola | plasma membrane | 27.61 | 23.63 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 24.58 | 23.32 |
| CDX80653 | Canola | plasma membrane | 23.57 | 23.1 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 24.24 | 23.0 |
| CDX82175 | Canola | extracellular | 17.85 | 22.65 |
| CDX99986 | Canola | plasma membrane | 25.93 | 22.06 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.93 | 22.0 |
| CDY18787 | Canola | plasma membrane | 27.95 | 21.45 |
| CDX86163 | Canola | plasma membrane | 21.55 | 21.33 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.1 | 21.13 |
| CDY25038 | Canola | plasma membrane | 26.26 | 21.08 |
| CDY05577 | Canola | plasma membrane | 26.26 | 20.42 |
| CDY05713 | Canola | extracellular | 10.1 | 20.41 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 21.89 | 19.17 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 23.57 | 19.02 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 23.57 | 19.02 |
| CDX82179 | Canola | plasma membrane | 21.89 | 18.52 |
| CDY05049 | Canola | plasma membrane | 18.18 | 18.49 |
| CDY12022 | Canola | plasma membrane | 21.89 | 18.41 |
| CDX82176 | Canola | extracellular | 22.56 | 18.36 |
| CDY03116 | Canola | plasma membrane | 21.55 | 18.13 |
| CDY70284 | Canola | plasma membrane | 23.57 | 17.99 |
| CDY21367 | Canola | golgi, plasma membrane | 22.56 | 17.82 |
| CDY62007 | Canola | golgi, plasma membrane | 22.56 | 17.82 |
| CDY03651 | Canola | plasma membrane | 23.57 | 17.37 |
| CDY03652 | Canola | plasma membrane | 22.9 | 17.17 |
| CDY13888 | Canola | plasma membrane | 18.52 | 14.86 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 17.51 | 14.73 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.52 | 14.36 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.85 | 14.29 |
| CDX70126 | Canola | plasma membrane | 18.86 | 13.9 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.85 | 12.99 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 17.85 | 12.96 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 17.85 | 12.71 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 17.85 | 12.71 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 17.85 | 12.62 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 17.51 | 12.53 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 12.46 | 12.21 |
| CDY05145 | Canola | plasma membrane | 12.12 | 12.12 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 9.43 | 11.76 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 11.78 | 11.63 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.09 | 11.34 |
| CDY50446 | Canola | mitochondrion | 8.08 | 10.04 |
| CDY05714 | Canola | cytosol | 4.71 | 6.57 |
| CDY31685 | Canola | cytosol | 0.34 | 4.55 |
Protein Annotations
| EnsemblPlants:CDY01502 | EnsemblPlantsGene:GSBRNA2T00112518001 | Gene3D:3.30.40.10 | GO:A0A078EK21 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF305 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY01502 | ProteinID:CDY01502.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | TMHMM:TMhelix |
| UniParc:UPI0004EDE1E7 | MapMan:19.2.2.1.5.3.3 | : | : | : | : |
Description
BnaC07g34920D
Coordinates
chrLK031927:-:195779..196672
Molecular Weight (calculated)
34020.1 Da
IEP (calculated)
6.088
GRAVY (calculated)
-0.464
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTIPSPLPP QEHYVTPPLT VIFTVVFLIF IFVGFFTLYF CKCILDTIMQ TWHIHHSGER EVTDNPLQPP EAPPVNPGLD LRIINSFPTF PYFSVKDLRE
101: EKYGLECAIC LLEFDEDHVL RLLTTCYHVF HQECIDLWFE SHKTCPVCRH DLDPPPPPEN TTNVLSNVDE MIIDVIQETS YDGGDQHHHH QTTTPIDTGT
201: SSGQSSCVNN ERSRKEQTLP ETFSRSHSTG HSIVRNKPEE EDKYTLRLPE HVKIKVTRGH SQTKSCVTFA ELVRNRSYAH RRFGEVSNQT VATHSGE
101: EKYGLECAIC LLEFDEDHVL RLLTTCYHVF HQECIDLWFE SHKTCPVCRH DLDPPPPPEN TTNVLSNVDE MIIDVIQETS YDGGDQHHHH QTTTPIDTGT
201: SSGQSSCVNN ERSRKEQTLP ETFSRSHSTG HSIVRNKPEE EDKYTLRLPE HVKIKVTRGH SQTKSCVTFA ELVRNRSYAH RRFGEVSNQT VATHSGE
001: MSTIIPSPLA PQPPQQHYVT PPLTVILTVI LLVFFFIGFF TLYFCKCFLD TMVQAWRLHH GGDTVSDNPL QQPEAPPVNP GLELRIINSF PTFPYSSVKD
101: LREEKYGLEC AICLLEFDGD HVLRLLTTCY HVFHQECIDL WFESHRTCPV CRRDLDPPPP PENTKPTVDE MIIDVIQETS DDEEDDHHRQ QTTTQIDTWP
201: SSGQTSSIKK EQNLPEKFSR SHSTGHSIVR NKPEEEDKYT LRLPEHVKIK VTRGHSQTES CVTFAELIRN RGYDHRRFGE VSGQTQSKN
101: LREEKYGLEC AICLLEFDGD HVLRLLTTCY HVFHQECIDL WFESHRTCPV CRRDLDPPPP PENTKPTVDE MIIDVIQETS DDEEDDHHRQ QTTTQIDTWP
201: SSGQTSSIKK EQNLPEKFSR SHSTGHSIVR NKPEEEDKYT LRLPEHVKIK VTRGHSQTES CVTFAELIRN RGYDHRRFGE VSGQTQSKN
Arabidopsis Description
ATL29RING-H2 finger protein ATL29 [Source:UniProtKB/Swiss-Prot;Acc:O49691]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.