CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75596	Soybean	endoplasmic reticulum, plasma membrane, plastid	77.02	77.27
KRH74402	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	43.37	46.53
CDY01502	Canola	plasma membrane	35.28	36.7
AT4G17920.1	Thale cress	plasma membrane	33.98	36.33
CDX77681	Canola	golgi, mitochondrion, plasma membrane, plastid	33.01	35.54
CDY63052	Canola	golgi, mitochondrion, plasma membrane, plastid	33.01	35.54
Bra025008.1-P	Field mustard	plastid	32.69	35.19
Bra013268.1-P	Field mustard	plasma membrane	33.01	34.69
CDX78812	Canola	plasma membrane	33.01	34.69
CDY44502	Canola	plasma membrane	33.01	34.69
AT5G46650.1	Thale cress	plasma membrane	32.36	34.6
Bra017535.1-P	Field mustard	nucleus, plasma membrane, plastid	30.42	33.45
CDY03202	Canola	plasma membrane	30.42	33.45
CDY35174	Canola	plasma membrane	30.42	33.45
Solyc08g005110.1.1	Tomato	plastid	28.8	32.48
Solyc08g076800.2.1	Tomato	plastid	25.89	28.27
KRH53320	Soybean	mitochondrion	9.06	26.42
KRH14610	Soybean	endoplasmic reticulum, nucleus, plastid	12.95	22.73
KRH38505	Soybean	plasma membrane, vacuole	20.06	21.75
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	23.3	21.43
KRH33975	Soybean	golgi, plasma membrane, vacuole	24.6	21.17
KRH09080	Soybean	endoplasmic reticulum, extracellular, plasma membrane	23.3	20.75
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.24	20.58
KRH72413	Soybean	cytosol, golgi, vacuole	24.6	20.32
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	22.33	20.29
KRH68588	Soybean	plasma membrane	23.95	20.22
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	21.68	20.06
KRG96857	Soybean	vacuole	23.62	19.47
KRH38504	Soybean	plasma membrane	22.65	19.34
KRH31340	Soybean	endoplasmic reticulum, plasma membrane	13.59	18.67
KRH13267	Soybean	plasma membrane	9.71	18.4
Bra012630.1-P	Field mustard	nucleus	34.63	17.29
CDX90435	Canola	nucleus	34.3	17.26
KRH16794	Soybean	plasma membrane	21.04	16.58
KRH16846	Soybean	endoplasmic reticulum, extracellular, plasma membrane	8.41	16.46
KRH72412	Soybean	nucleus, plasma membrane, plastid	20.39	16.32
KRH62061	Soybean	plastid	13.59	15.5
KRH39345	Soybean	endoplasmic reticulum, vacuole	20.06	14.8
KRH76331	Soybean	endoplasmic reticulum	20.39	14.79
KRH70712	Soybean	endoplasmic reticulum, extracellular, vacuole	10.03	14.55
KRH16295	Soybean	plasma membrane	18.12	14.18
KRH52730	Soybean	golgi, plasma membrane, vacuole	17.8	13.41
KRH62179	Soybean	plasma membrane	14.56	13.39

Protein Annotations

EntrezGene:102667755	MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EMBL:ACUP02005221	EnsemblPlantsGene:GLYMA_08G270800	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0043161	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	UniProt:K7L970	EnsemblPlants:KRH45424
ProteinID:KRH45424	ProteinID:KRH45424.1	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF305
SMART:SM00184	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI00023CA4B0	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:35210516..35211445

Molecular Weight (calculated)

34587.2 Da

IEP (calculated)

6.742

GRAVY (calculated)

-0.331

Length

309 amino acids

Sequence
(BLAST)

001: MSSSSAAAPY NTPPALIAFL LGMLVVCFVV FSIVYMCKYC FSGVINTWAS QPIISSSLIR LTPFRSPPRG LDPKLLQVFP TFPYASIKDL SKDQKYDLEC
101: AICLLEFEDD NMVRLLTLCC HVFHQDCIDL WLRSHKTCPV CRRHLDSPPN EIEKVVDVNE GVVVTSTSRE IHIDVTEGKL DGCGDDDDDD TSGGNKKQEH
201: EHGHENHEVI THQQGGKTFA RSHSTGHSIV LIRRDGNKEK NDHEKYTLIL PEHVLRERHN NKHNCTRSCV SYKDMAMLVA PLPVAPYSNC GFVQPVSPAG
301: TSSPDHTRK

Best Arabidopsis Sequence Match ( AT4G17920.1 )
(BLAST)

001: MSTIIPSPLA PQPPQQHYVT PPLTVILTVI LLVFFFIGFF TLYFCKCFLD TMVQAWRLHH GGDTVSDNPL QQPEAPPVNP GLELRIINSF PTFPYSSVKD
101: LREEKYGLEC AICLLEFDGD HVLRLLTTCY HVFHQECIDL WFESHRTCPV CRRDLDPPPP PENTKPTVDE MIIDVIQETS DDEEDDHHRQ QTTTQIDTWP
201: SSGQTSSIKK EQNLPEKFSR SHSTGHSIVR NKPEEEDKYT LRLPEHVKIK VTRGHSQTES CVTFAELIRN RGYDHRRFGE VSGQTQSKN

Arabidopsis Description

ATL29RING-H2 finger protein ATL29 [Source:UniProtKB/Swiss-Prot;Acc:O49691]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.