Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 38.22 | 48.86 |
| KRH53320 | Soybean | mitochondrion | 17.78 | 37.74 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plasma membrane | 14.67 | 19.64 |
| KRH13267 | Soybean | plasma membrane | 14.22 | 19.63 |
| PGSC0003DMT400001221 | Potato | vacuole | 15.56 | 18.72 |
| GSMUA_Achr4P12270_001 | Banana | plastid | 13.33 | 17.34 |
| CDY62419 | Canola | cytosol | 11.56 | 17.33 |
| TraesCS1A01G192600.1 | Wheat | plastid | 16.0 | 17.06 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 25.33 | 16.96 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 21.33 | 16.67 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 26.22 | 16.43 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.0 | 16.17 |
| Os10t0574400-01 | Rice | mitochondrion, plasma membrane, plastid | 14.22 | 16.08 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 24.0 | 15.88 |
| KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 11.11 | 15.82 |
| KRH38504 | Soybean | plasma membrane | 25.33 | 15.75 |
| KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.0 | 15.56 |
| KRH16794 | Soybean | plasma membrane | 27.11 | 15.56 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 26.22 | 15.29 |
| Solyc11g066510.1.1 | Tomato | nucleus | 16.0 | 15.25 |
| KRH38505 | Soybean | plasma membrane, vacuole | 19.11 | 15.09 |
| Zm00001d030038_P001 | Maize | plastid | 15.56 | 15.09 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 25.33 | 15.04 |
| KRH68588 | Soybean | plasma membrane | 24.0 | 14.75 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 24.44 | 14.71 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 20.0 | 14.61 |
| AT2G35420.1 | Thale cress | plasma membrane, plastid | 16.0 | 14.17 |
| KRG96857 | Soybean | vacuole | 23.56 | 14.13 |
| KRH70712 | Soybean | endoplasmic reticulum, extracellular, vacuole | 13.33 | 14.08 |
| OQU92087 | Sorghum | golgi, peroxisome, plastid | 15.56 | 14.06 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 18.67 | 13.59 |
| Bra005343.1-P | Field mustard | plastid | 16.0 | 12.9 |
| KRH62061 | Soybean | plastid | 14.67 | 12.18 |
| KRH62179 | Soybean | plasma membrane | 17.78 | 11.9 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 21.78 | 11.69 |
| KRH76331 | Soybean | endoplasmic reticulum | 21.33 | 11.27 |
| KRH16295 | Soybean | plasma membrane | 19.56 | 11.14 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 19.11 | 10.49 |
| Bra017320.1-P | Field mustard | extracellular, nucleus, plasma membrane | 15.56 | 10.42 |
Protein Annotations
| EntrezGene:100804862 | MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EMBL:ACUP02007140 | EnsemblPlantsGene:GLYMA_11G242800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0061630 | UniProt:I1LNH1 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH31340 |
| ProteinID:KRH31340 | ProteinID:KRH31340.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF440 |
| SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000233D3EA | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:33680119..33681083
Molecular Weight (calculated)
25224.5 Da
IEP (calculated)
4.164
GRAVY (calculated)
-0.162
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVTQYTFLV VLVWSSLCTN AQWNNPINYS PFDEINKGEN SKVTWSVSLS CVFISILVFV LFKLRACCCS SSGRRNTTKL VAAATETIEK CPVFEYSTAK
101: ELKVGNGTEE CAVCLVEFED SDTIKMLPKC QHVFHQHCID TWLPSRMTCP ICRQKLTSED NTVIDVVDVV VPTEQQEHDD TESTESEVAV TAAEEQPQPD
201: ETAEHETDTD HSTVVEQVVE FEVVA
101: ELKVGNGTEE CAVCLVEFED SDTIKMLPKC QHVFHQHCID TWLPSRMTCP ICRQKLTSED NTVIDVVDVV VPTEQQEHDD TESTESEVAV TAAEEQPQPD
201: ETAEHETDTD HSTVVEQVVE FEVVA
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.