Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 26.76 | 36.08 |
| KRH62179 | Soybean | plasma membrane | 48.83 | 30.95 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 38.03 | 22.95 |
| GSMUA_Achr3P05190_001 | Banana | endoplasmic reticulum, golgi, plastid | 39.44 | 21.88 |
| GSMUA_Achr9P13810_001 | Banana | golgi, mitochondrion, plastid, vacuole | 37.56 | 21.74 |
| CDX70126 | Canola | plasma membrane | 39.91 | 21.09 |
| Bra009136.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 39.44 | 20.79 |
| KRH53320 | Soybean | mitochondrion | 10.33 | 20.75 |
| PGSC0003DMT400078951 | Potato | plasma membrane | 40.85 | 20.62 |
| AT5G05810.1 | Thale cress | endoplasmic reticulum, golgi | 38.97 | 20.39 |
| Os06t0695900-01 | Rice | endoplasmic reticulum, vacuole | 37.56 | 20.05 |
| Solyc07g007440.1.1 | Tomato | plasma membrane, vacuole | 39.44 | 20.0 |
| TraesCSU01G093700.1 | Wheat | plastid | 36.62 | 19.6 |
| HORVU7Hr1G098470.1 | Barley | plastid | 36.62 | 19.5 |
| TraesCS7D01G420000.1 | Wheat | plastid | 36.62 | 19.45 |
| TraesCS7B01G327800.1 | Wheat | plastid | 36.62 | 19.4 |
| Zm00001d014612_P001 | Maize | peroxisome | 36.15 | 19.4 |
| VIT_11s0052g00530.t01 | Wine grape | plasma membrane | 41.31 | 19.26 |
| KRH62061 | Soybean | plastid | 24.41 | 19.19 |
| EER90301 | Sorghum | endoplasmic reticulum, golgi, vacuole | 35.68 | 18.91 |
| KRH76331 | Soybean | endoplasmic reticulum | 32.86 | 16.43 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 30.99 | 16.1 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 31.46 | 15.99 |
| KRH13267 | Soybean | plasma membrane | 12.21 | 15.95 |
| KRH16295 | Soybean | plasma membrane | 29.58 | 15.95 |
| KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 13.15 | 15.91 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 22.07 | 14.07 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 21.13 | 13.39 |
| KRH31340 | Soybean | endoplasmic reticulum, plasma membrane | 14.08 | 13.33 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 20.19 | 12.65 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 16.9 | 12.5 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 21.6 | 12.3 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 20.66 | 12.26 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 21.13 | 11.87 |
| KRH38505 | Soybean | plasma membrane, vacuole | 15.49 | 11.58 |
| KRH68588 | Soybean | plasma membrane | 19.72 | 11.48 |
| KRG96857 | Soybean | vacuole | 20.19 | 11.47 |
| KRH38504 | Soybean | plasma membrane | 18.78 | 11.05 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 15.96 | 11.04 |
| KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 17.84 | 10.95 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 19.25 | 10.62 |
| KRH16794 | Soybean | plasma membrane | 18.78 | 10.2 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 14.55 | 10.03 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | UniProt:A0A0R0L2G1 | EMBL:ACUP02000791 | EnsemblPlantsGene:GLYMA_02G106400 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH70712 | ProteinID:KRH70712 |
| ProteinID:KRH70712.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF78 | SMART:SM00184 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI00023BE4C4 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:10143694..10144335
Molecular Weight (calculated)
24301.7 Da
IEP (calculated)
8.167
GRAVY (calculated)
0.029
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTVSLKRSY HVFLLPFKPS IAVVVCVLTI IISLTSLLLF YIKLCNDGIT DDRGKNSASW MVVSFTERKN FGIDWSMVES LPNFKFRVLR GQKEGLNCAV
101: CLNKFKVAKV LRLLSKCKHA FHVECVDSWL DVHSMCPLCC YCMDPEDIFL VEEAKPFHQS HQQQNNDQGC VCLNLDLEKQ GIVKSRQRHL FVWGGGRRNN
201: RGVATESEVD DVI
101: CLNKFKVAKV LRLLSKCKHA FHVECVDSWL DVHSMCPLCC YCMDPEDIFL VEEAKPFHQS HQQQNNDQGC VCLNLDLEKQ GIVKSRQRHL FVWGGGRRNN
201: RGVATESEVD DVI
001: MSSSSLILLF STLSLFLNVS LADNHTAVVI TTSDTPPPLP PPSPPPRHNF TSSLMPGIAV VIAVLTAFFS LTFLLLLYVK HCKRRNGSVY VNHPQRFAIT
101: RYGGGYYNGG GVVGGRKNSG IDRSVIESLP VFRFGALSGH KDGLECAVCL ARFEPTEVLR LLPKCKHAFH VECVDTWLDA HSTCPLCRYR VDPEDILLIG
201: DCNSWFELQF SKDESNSVNN NPPGLTRFIP VSRISGRHSS AGERASRLNE IRTSSSYKSN PMSFRRSLDS SLKVNDAGEE KSESVAVNCL DRLQRKDGLL
301: LIPNRESFEG RFEHRIIISG GNRDDQRWSE VRPSDLLYLR SEMILSDCRK LAAAEGGRDV INGRSVSELT GIERRRRWGG EPRQRQATAV ISRWLAWSHR
401: ASASSIV
101: RYGGGYYNGG GVVGGRKNSG IDRSVIESLP VFRFGALSGH KDGLECAVCL ARFEPTEVLR LLPKCKHAFH VECVDTWLDA HSTCPLCRYR VDPEDILLIG
201: DCNSWFELQF SKDESNSVNN NPPGLTRFIP VSRISGRHSS AGERASRLNE IRTSSSYKSN PMSFRRSLDS SLKVNDAGEE KSESVAVNCL DRLQRKDGLL
301: LIPNRESFEG RFEHRIIISG GNRDDQRWSE VRPSDLLYLR SEMILSDCRK LAAAEGGRDV INGRSVSELT GIERRRRWGG EPRQRQATAV ISRWLAWSHR
401: ASASSIV
Arabidopsis Description
ATL43ATL43 [Source:UniProtKB/TrEMBL;Acc:A0A178ULT1]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.