Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76331 | Soybean | endoplasmic reticulum | 87.11 | 85.68 |
| PGSC0003DMT400070587 | Potato | plastid | 48.69 | 59.3 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 45.35 | 58.64 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 57.52 | 51.39 |
| CDY05713 | Canola | extracellular | 17.9 | 51.02 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 43.91 | 49.73 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 45.35 | 48.72 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 46.54 | 47.68 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 46.3 | 47.55 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 43.2 | 47.51 |
| Bra011068.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 47.26 | 47.48 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 48.93 | 47.45 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 47.02 | 46.9 |
| Bra024178.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 47.02 | 46.9 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 46.54 | 46.76 |
| Bra010349.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 46.78 | 46.67 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 41.29 | 46.63 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 46.3 | 46.52 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 46.06 | 46.51 |
| CDY13888 | Canola | plasma membrane | 41.05 | 46.49 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 40.33 | 44.13 |
| KRH16295 | Soybean | plasma membrane | 39.14 | 41.52 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 36.28 | 41.42 |
| KRH62061 | Soybean | plastid | 26.73 | 41.33 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 34.13 | 40.74 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 35.56 | 40.49 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 22.43 | 39.5 |
| CDY05714 | Canola | cytosol | 19.57 | 38.5 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 37.47 | 38.29 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 31.74 | 37.05 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 32.7 | 34.77 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 31.5 | 34.29 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 31.74 | 33.84 |
| KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 12.65 | 33.54 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.41 | 32.41 |
| TraesCS1D01G453000.1 | Wheat | extracellular, plasma membrane | 32.7 | 31.57 |
| KRH70712 | Soybean | endoplasmic reticulum, extracellular, vacuole | 15.99 | 31.46 |
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 27.92 | 29.92 |
| KRH62179 | Soybean | plasma membrane | 23.63 | 29.46 |
| KRH53320 | Soybean | mitochondrion | 7.4 | 29.25 |
| Zm00001d009777_P001 | Maize | extracellular, golgi, plasma membrane | 28.16 | 28.99 |
| EES18815 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 30.79 | 27.27 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 19.81 | 24.7 |
| KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 10.26 | 24.43 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 19.57 | 24.12 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 19.09 | 23.95 |
| KRG96857 | Soybean | vacuole | 20.76 | 23.2 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 19.81 | 23.12 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 20.53 | 22.99 |
| KRH68588 | Soybean | plasma membrane | 20.05 | 22.95 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 20.29 | 22.43 |
| KRH31340 | Soybean | endoplasmic reticulum, plasma membrane | 11.69 | 21.78 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 15.75 | 21.43 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 14.8 | 20.06 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 18.38 | 19.95 |
| KRH38505 | Soybean | plasma membrane, vacuole | 13.13 | 19.3 |
| KRH16794 | Soybean | plasma membrane | 17.9 | 19.13 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 12.89 | 18.75 |
| KRH13267 | Soybean | plasma membrane | 7.16 | 18.4 |
| KRH38504 | Soybean | plasma membrane | 15.04 | 17.4 |
| KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 13.84 | 16.71 |
Protein Annotations
| EntrezGene:100806950 | MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EMBL:ACUP02005930 | EnsemblPlantsGene:GLYMA_09G194100 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0061630 | UniProt:I1L4L9 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH39345 |
| ProteinID:KRH39345 | ProteinID:KRH39345.1 | ProteinID:KRH39346.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 |
| PANTHER:PTHR14155:SF95 | SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0002339012 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:41846172..41848032
Molecular Weight (calculated)
47659.8 Da
IEP (calculated)
7.639
GRAVY (calculated)
-0.390
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQLGGVSVI LLVLSVLCFH VRAQTSAPSS GDAVSNFQPS LAVVIGILGV MFLLTFFLLM YAKFCHRRHG GASAVGDSEN QLTFVRSRSR FSGIDKTVIE
101: SLPFFRFSAL KGLKEGLECA VCLSKFEDVE ILRLVPKCKH AFHIDCIDHW LEKHSTCPIC RHRVNPEDHT TFTYSNSLRM LAGEESNIEI LVQREEEEHH
201: GSSRFSVIGS SSFRKTVKEE ELLIQKGAED SDGNQKGYHK HNHRITISDV VFKHRWSNVS SSDLMFLNSE MLNDTSSNRF SSNLESITRG VVVENEQIMN
301: IKEEMERKIS FENKVVGALN NIVSDHKEDP PFTSDSAPKY VNPGEKRSMS EITAVSRFGD LGMKMRVLKD SDSLQNNLKE ERMRQIWFPI ARRTAQWFVN
401: REERRSLQSQ NNKQQPLDV
101: SLPFFRFSAL KGLKEGLECA VCLSKFEDVE ILRLVPKCKH AFHIDCIDHW LEKHSTCPIC RHRVNPEDHT TFTYSNSLRM LAGEESNIEI LVQREEEEHH
201: GSSRFSVIGS SSFRKTVKEE ELLIQKGAED SDGNQKGYHK HNHRITISDV VFKHRWSNVS SSDLMFLNSE MLNDTSSNRF SSNLESITRG VVVENEQIMN
301: IKEEMERKIS FENKVVGALN NIVSDHKEDP PFTSDSAPKY VNPGEKRSMS EITAVSRFGD LGMKMRVLKD SDSLQNNLKE ERMRQIWFPI ARRTAQWFVN
401: REERRSLQSQ NNKQQPLDV
001: MYQIFFFFLP LLHSYASAQT PPPFRNGDLV ANFEPSLAVV TGVLAIMFAL TFVLLVYAKC CHIDLRSGSG DRRRHDRRLR QGIFFNRSTA SSDRFSGLDK
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV
Arabidopsis Description
ATL42E3 ubiquitin-protein ligase ATL42 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF85]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.