Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 70.19 | 84.91 |
| Zm00001d009777_P001 | Maize | extracellular, golgi, plasma membrane | 72.09 | 83.78 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 51.8 | 63.64 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 49.26 | 59.29 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 49.26 | 59.14 |
| TraesCS1D01G453000.1 | Wheat | extracellular, plasma membrane | 51.8 | 56.45 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.16 | 56.02 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 32.35 | 43.59 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 31.71 | 40.87 |
| PGSC0003DMT400070587 | Potato | plastid | 29.18 | 40.12 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 26.64 | 38.89 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 29.39 | 38.72 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 29.81 | 38.32 |
| CDY05713 | Canola | extracellular | 11.42 | 36.73 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 17.55 | 34.87 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 26.85 | 34.32 |
| CDY13888 | Canola | plasma membrane | 26.43 | 33.78 |
| KRH76331 | Soybean | endoplasmic reticulum | 29.39 | 32.63 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 26.85 | 32.56 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.22 | 32.38 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 28.54 | 32.14 |
| Bra024178.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 28.54 | 32.14 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.16 | 32.08 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 28.12 | 32.05 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 25.79 | 32.02 |
| Bra011068.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 28.12 | 31.89 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 27.91 | 31.65 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 27.91 | 31.65 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 27.06 | 31.37 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 26.85 | 31.05 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 27.27 | 30.79 |
| Bra010349.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 27.27 | 30.71 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.91 | 30.56 |
| KRH62061 | Soybean | plastid | 16.91 | 29.52 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 29.18 | 29.42 |
| KRH16295 | Soybean | plasma membrane | 24.31 | 29.11 |
| EER90301 | Sorghum | endoplasmic reticulum, golgi, vacuole | 23.89 | 28.11 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 23.68 | 27.32 |
| CDY05714 | Canola | cytosol | 11.63 | 25.82 |
| OQU82489 | Sorghum | plasma membrane, vacuole | 10.57 | 21.1 |
| EES18560 | Sorghum | golgi, plasma membrane | 16.7 | 20.1 |
| EER92732 | Sorghum | golgi | 15.22 | 19.57 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 16.07 | 18.45 |
| EES05293 | Sorghum | endoplasmic reticulum, golgi, plastid | 14.38 | 17.99 |
| KXG26428 | Sorghum | plasma membrane | 15.01 | 17.49 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 14.38 | 16.08 |
| OQU92087 | Sorghum | golgi, peroxisome, plastid | 8.46 | 16.06 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 11.84 | 14.47 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 15.43 | 13.39 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EntrezGene:8065344 | UniProt:C5YX35 | EnsemblPlants:EES18815 | ProteinID:EES18815 |
| ProteinID:EES18815.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF220 | SMART:SM00184 | EnsemblPlantsGene:SORBI_3009G259800 |
| SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0001A88907 | RefSeq:XP_002440385.1 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:59310988..59312409
Molecular Weight (calculated)
50540.5 Da
IEP (calculated)
4.907
GRAVY (calculated)
-0.178
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPVPGQQL ALLAVLFSAA AVAAAQPTTD ELSASPAADN NSAPAGVGIK VSFRPRVAIV VGIFTMIFSL TFILLMYAKF CHPSSSPSPA ASALVGGGET
101: GGNNGAAAAA AAVGVPKQVI ESLPFFRFAT LRGARQGMEC SVCLARFDDA DLLRLLPRCH HAFHLDCVDR WLQSSASCPL CRTSVDADDA TLGLKYPSSA
201: RIVFGGDALS SGRFDDAAAA AAAGTAGSGR DLLDIFVERV PGPDTKPQQQ QQQQVGDVDD EEEAISSSVA LPPGQELDRH KHRIIVSDVV FKSRWSELNS
301: ADLIALDMEM LRSMSSSSGR FVFPPDSPYC PEYSNEAQQA PNNKEIAAEE EEEEDEDGVV PTTSRKRLLK PVVVVDARLG GGCSSGSAVS ASAARMISSG
401: VRSMSEIVSL PRLRAAARER LSEEENRNRR WLPIARRTAR WFAGRASRGQ QQEEEEEEEH RAVHVVAAEH DDV
101: GGNNGAAAAA AAVGVPKQVI ESLPFFRFAT LRGARQGMEC SVCLARFDDA DLLRLLPRCH HAFHLDCVDR WLQSSASCPL CRTSVDADDA TLGLKYPSSA
201: RIVFGGDALS SGRFDDAAAA AAAGTAGSGR DLLDIFVERV PGPDTKPQQQ QQQQVGDVDD EEEAISSSVA LPPGQELDRH KHRIIVSDVV FKSRWSELNS
301: ADLIALDMEM LRSMSSSSGR FVFPPDSPYC PEYSNEAQQA PNNKEIAAEE EEEEDEDGVV PTTSRKRLLK PVVVVDARLG GGCSSGSAVS ASAARMISSG
401: VRSMSEIVSL PRLRAAARER LSEEENRNRR WLPIARRTAR WFAGRASRGQ QQEEEEEEEH RAVHVVAAEH DDV
001: MYQIFFFFLP LLHSYASAQT PPPFRNGDLV ANFEPSLAVV TGVLAIMFAL TFVLLVYAKC CHIDLRSGSG DRRRHDRRLR QGIFFNRSTA SSDRFSGLDK
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV
Arabidopsis Description
ATL42E3 ubiquitin-protein ligase ATL42 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF85]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.