Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 92.97 | 89.82 |
| CDY05713 | Canola | extracellular | 34.05 | 85.71 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 78.65 | 78.44 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 75.68 | 71.79 |
| CDY05714 | Canola | cytosol | 38.11 | 66.2 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 63.78 | 56.59 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 63.51 | 56.35 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 61.62 | 55.88 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 61.08 | 55.26 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 62.16 | 54.76 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 59.73 | 53.25 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 41.08 | 46.91 |
| PGSC0003DMT400070587 | Potato | plastid | 42.97 | 46.22 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 46.49 | 41.05 |
| KRH76331 | Soybean | endoplasmic reticulum | 46.49 | 40.38 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 39.73 | 38.58 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 38.38 | 38.38 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 46.22 | 36.46 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 33.78 | 35.61 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 34.86 | 35.05 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 34.59 | 34.88 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 33.24 | 34.26 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 33.78 | 31.81 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 33.78 | 31.73 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 20.27 | 31.51 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 31.35 | 30.13 |
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 31.62 | 29.92 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.59 | 29.63 |
| TraesCS1D01G453000.1 | Wheat | extracellular, plasma membrane | 34.32 | 29.26 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 27.84 | 29.18 |
| CDX70126 | Canola | plasma membrane | 30.54 | 28.04 |
| CDY31686 | Canola | nucleus | 7.84 | 27.62 |
| CDX75097 | Canola | extracellular | 10.27 | 27.54 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.54 | 27.46 |
| Zm00001d009777_P001 | Maize | extracellular, golgi, plasma membrane | 29.73 | 27.03 |
| CDY48058 | Canola | extracellular | 10.0 | 26.81 |
| EES18815 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 33.78 | 26.43 |
| CDX82175 | Canola | extracellular | 16.22 | 25.64 |
| CDY62419 | Canola | cytosol | 8.92 | 22.0 |
| CDX90377 | Canola | extracellular, golgi | 18.11 | 21.75 |
| CDY39477 | Canola | extracellular | 17.84 | 21.29 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 16.49 | 21.25 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 16.22 | 20.91 |
| CDY53236 | Canola | plasma membrane | 19.19 | 20.46 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.22 | 19.74 |
| CDY03202 | Canola | plasma membrane | 14.59 | 19.22 |
| CDY35174 | Canola | plasma membrane | 14.59 | 19.22 |
| CDY05049 | Canola | plasma membrane | 15.14 | 19.18 |
| CDX99986 | Canola | plasma membrane | 17.84 | 18.91 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 15.95 | 18.85 |
| CDX80653 | Canola | plasma membrane | 15.41 | 18.81 |
| CDY21367 | Canola | golgi, plasma membrane | 18.92 | 18.62 |
| CDY18787 | Canola | plasma membrane | 19.46 | 18.6 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.57 | 18.57 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 15.68 | 18.53 |
| CDY01502 | Canola | plasma membrane | 14.86 | 18.52 |
| CDY62007 | Canola | golgi, plasma membrane | 18.65 | 18.35 |
| CDX86163 | Canola | plasma membrane | 14.86 | 18.33 |
| CDX82176 | Canola | extracellular | 17.84 | 18.08 |
| CDY44502 | Canola | plasma membrane | 14.32 | 18.03 |
| CDX78812 | Canola | plasma membrane | 14.32 | 18.03 |
| CDY70284 | Canola | plasma membrane | 18.92 | 17.99 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 15.95 | 17.4 |
| CDY03651 | Canola | plasma membrane | 18.65 | 17.12 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 17.03 | 17.12 |
| CDY25038 | Canola | plasma membrane | 17.03 | 17.03 |
| CDY03116 | Canola | plasma membrane | 16.22 | 17.0 |
| CDY12022 | Canola | plasma membrane | 16.22 | 17.0 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 16.76 | 16.85 |
| CDY05577 | Canola | plasma membrane | 17.03 | 16.49 |
| CDY03652 | Canola | plasma membrane | 17.57 | 16.41 |
| CDX82179 | Canola | plasma membrane | 15.41 | 16.24 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 7.03 | 10.92 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 6.76 | 10.5 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 8.11 | 9.9 |
| CDY05145 | Canola | plasma membrane | 7.57 | 9.43 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 7.57 | 9.3 |
| CDY31685 | Canola | cytosol | 0.54 | 9.09 |
| CDX90435 | Canola | nucleus | 14.59 | 8.79 |
| CDY50446 | Canola | mitochondrion | 3.78 | 5.86 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | GO:A0A078FNF9 | UniProt:A0A078FNF9 | EnsemblPlants:CDY13888 | ProteinID:CDY13888 |
| ProteinID:CDY13888.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00078340001 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF431 | SMART:SM00184 |
| SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE12EF | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g43900DBnaA09g43900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNF9]
Coordinates
chrLK032038:-:807079..808248
Molecular Weight (calculated)
42049.3 Da
IEP (calculated)
8.398
GRAVY (calculated)
-0.245
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPPKAIFML FLSIFFFLDY VSAQSPPPPP FLYAANGLFQ PSLAIITGVF SIVFTLTFVL LIYAKCFHND LRSETYEDGE IGRLDRLWQG LFSQSSRFSG
101: LDKAAIESLP FFRFSALKGS KQGLECSVCL SKFEDVEILR LLPKCKHAFH IECIDEWLEQ HATCPLCRNR VSIEDELSVF GGGSNNSMRI MSQLSEDGSS
201: RFSSFRKILN FGKNDNSLSL VEQGNEKCLH KFNHRIVVSD AVFKNRWSNV TPADLTFLTS NMLSSMSSDR FSSIDRVERG DLRDKEEIDM KRMVNNNKDS
301: TRRVVSEITA VPRLSGMDAS TASTSRSDVI AAVEERRRRL WLPIARKTAQ WFVNREKKNE LKTTGQDLNV
101: LDKAAIESLP FFRFSALKGS KQGLECSVCL SKFEDVEILR LLPKCKHAFH IECIDEWLEQ HATCPLCRNR VSIEDELSVF GGGSNNSMRI MSQLSEDGSS
201: RFSSFRKILN FGKNDNSLSL VEQGNEKCLH KFNHRIVVSD AVFKNRWSNV TPADLTFLTS NMLSSMSSDR FSSIDRVERG DLRDKEEIDM KRMVNNNKDS
301: TRRVVSEITA VPRLSGMDAS TASTSRSDVI AAVEERRRRL WLPIARKTAQ WFVNREKKNE LKTTGQDLNV
001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
Arabidopsis Description
ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.