Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 93.61 | 93.61 |
| AT2G34990.2 | Thale cress | plasma membrane | 36.1 | 34.88 |
| CDX75097 | Canola | extracellular | 14.7 | 33.33 |
| CDY48058 | Canola | extracellular | 14.38 | 32.61 |
| CDY39477 | Canola | extracellular | 28.75 | 29.03 |
| CDX90377 | Canola | extracellular, golgi | 28.43 | 28.9 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 26.2 | 28.08 |
| CDX80653 | Canola | plasma membrane | 26.2 | 27.06 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.2 | 26.97 |
| CDY53236 | Canola | plasma membrane | 29.39 | 26.51 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 29.07 | 26.38 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 30.99 | 26.36 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 30.99 | 26.36 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 19.81 | 26.16 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 28.11 | 25.96 |
| CDX86163 | Canola | plasma membrane | 24.6 | 25.67 |
| CDX82175 | Canola | extracellular | 19.17 | 25.64 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 24.92 | 25.57 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 17.25 | 25.47 |
| CDY05049 | Canola | plasma membrane | 23.64 | 25.34 |
| CDY18787 | Canola | plasma membrane | 31.31 | 25.32 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 33.23 | 25.24 |
| Zm00001d020789_P001 | Maize | plasma membrane | 31.95 | 25.13 |
| GSMUA_AchrUn_... | Banana | plastid | 28.75 | 25.0 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.8 | 24.86 |
| CDX82179 | Canola | plasma membrane | 27.8 | 24.79 |
| CDY31686 | Canola | nucleus | 8.31 | 24.76 |
| Zm00001d005936_P001 | Maize | plasma membrane | 30.99 | 24.68 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 30.03 | 24.48 |
| EES18560 | Sorghum | golgi, plasma membrane | 30.67 | 24.43 |
| CDX99986 | Canola | plasma membrane | 27.16 | 24.36 |
| CDY01502 | Canola | plasma membrane | 23.0 | 24.24 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 30.35 | 24.23 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 27.16 | 24.08 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 29.71 | 24.03 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.86 | 23.94 |
| CDX78812 | Canola | plasma membrane | 22.36 | 23.81 |
| CDY44502 | Canola | plasma membrane | 22.36 | 23.81 |
| CDY03116 | Canola | plasma membrane | 26.84 | 23.8 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 30.67 | 23.76 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 27.16 | 23.74 |
| CDY21367 | Canola | golgi, plasma membrane | 28.43 | 23.67 |
| CDY12022 | Canola | plasma membrane | 26.52 | 23.51 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 29.71 | 23.48 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 29.07 | 23.45 |
| TraesCS6D01G113000.1 | Wheat | golgi | 30.03 | 23.44 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 29.71 | 23.43 |
| CDY62007 | Canola | golgi, plasma membrane | 28.11 | 23.4 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 30.35 | 23.4 |
| Zm00001d031261_P001 | Maize | golgi | 28.11 | 23.34 |
| CDY25038 | Canola | plasma membrane | 27.48 | 23.24 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 25.24 | 22.97 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 23.0 | 22.86 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 29.39 | 22.77 |
| CDY03651 | Canola | plasma membrane | 29.07 | 22.58 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 27.8 | 22.54 |
| CDY70284 | Canola | plasma membrane | 27.8 | 22.36 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 20.45 | 22.3 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 20.45 | 22.3 |
| Os08t0484200-01 | Rice | golgi | 29.39 | 22.28 |
| CDY05577 | Canola | plasma membrane | 27.16 | 22.25 |
| CDX82176 | Canola | extracellular | 25.88 | 22.19 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.11 | 21.89 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 29.39 | 21.85 |
| CDY03202 | Canola | plasma membrane | 19.49 | 21.71 |
| TraesCS7B01G081700.1 | Wheat | golgi | 28.43 | 21.5 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 30.35 | 21.49 |
| EER92732 | Sorghum | golgi | 25.24 | 21.47 |
| CDY03652 | Canola | plasma membrane | 27.16 | 21.46 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 24.28 | 21.41 |
| CDY35174 | Canola | plasma membrane | 19.17 | 21.35 |
| TraesCS7D01G178000.1 | Wheat | golgi | 27.8 | 21.32 |
| Os03t0188200-01 | Rice | golgi | 23.96 | 21.25 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.48 | 21.23 |
| TraesCS7A01G176700.1 | Wheat | golgi | 28.11 | 21.2 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 23.96 | 21.01 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.16 | 20.99 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 27.16 | 20.94 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 23.64 | 20.85 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 27.48 | 20.72 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 23.96 | 20.72 |
| GSMUA_Achr10P... | Banana | plasma membrane | 25.56 | 20.62 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 23.32 | 20.56 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 27.16 | 20.09 |
| Zm00001d018122_P001 | Maize | vacuole | 26.84 | 20.05 |
| Zm00001d048230_P001 | Maize | golgi | 23.96 | 19.74 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 24.28 | 19.64 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 27.16 | 19.45 |
| HORVU4Hr1G057610.1 | Barley | plastid | 25.24 | 19.17 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 18.53 | 19.14 |
| CDY62419 | Canola | cytosol | 8.95 | 18.67 |
| TraesCS4D01G200100.1 | Wheat | plastid | 24.6 | 18.6 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 14.06 | 18.49 |
| CDY05713 | Canola | extracellular | 8.63 | 18.37 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 22.36 | 18.28 |
| CDY05145 | Canola | plasma membrane | 17.25 | 18.18 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 22.36 | 18.09 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 17.25 | 17.94 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 13.42 | 17.65 |
| TraesCS4B01G199100.1 | Wheat | plastid | 24.6 | 17.23 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 22.36 | 16.83 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 28.75 | 16.51 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 22.68 | 16.32 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 18.21 | 16.15 |
| CDY13888 | Canola | plasma membrane | 18.53 | 15.68 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 18.53 | 15.63 |
| CDY50446 | Canola | mitochondrion | 11.82 | 15.48 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 20.45 | 15.35 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.81 | 15.2 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 20.13 | 15.11 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 20.13 | 15.0 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 19.49 | 14.91 |
| CDX70126 | Canola | plasma membrane | 19.17 | 14.89 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.21 | 14.88 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 19.49 | 14.7 |
| CDX90435 | Canola | nucleus | 22.36 | 11.4 |
| CDY05714 | Canola | cytosol | 6.07 | 8.92 |
| CDY31685 | Canola | cytosol | 0.32 | 4.55 |
Protein Annotations
| EnsemblPlants:CDX84270 | EnsemblPlantsGene:GSBRNA2T00141351001 | Gene3D:3.30.40.10 | GO:A0A078D559 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX84270 | ProteinID:CDX84270.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | TMHMM:TMhelix |
| UniParc:UPI0004EF0640 | MapMan:19.2.2.1.5.3.3 | : | : | : | : |
Description
BnaC04g10320D
Coordinates
chrLK031836:+:1302904..1303845
Molecular Weight (calculated)
35658.4 Da
IEP (calculated)
7.650
GRAVY (calculated)
-0.402
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MPADDMPQPG FETNESDLAI MVVTALTFSI FIVGLASVCY RWTARRFYTD EQSVNLSTHP EHELRTVRRG TTRRGIDAAI VESFQTFLYS EVKEQRIGKG
101: GVECVVCLCE FQDDDRLSLM PNCCHVYHAD CVSVWLSDHS TCPLCRVDLV FQQGQGSDPD PELGVVDTTE ARLSESMMWT NRSRPLRSRS MRLPHCRVSD
201: ISLSRSHSTG HCVAEPVENL DRFTLRLPDG VRRRLIKKTL VRSSCGLYRS RSVGSRSKRS VFSEQWCNYK NHRRIHSMTL SFTDHLRVWL AGDVVAPPNS
301: EQSSRELRPD DLV
101: GVECVVCLCE FQDDDRLSLM PNCCHVYHAD CVSVWLSDHS TCPLCRVDLV FQQGQGSDPD PELGVVDTTE ARLSESMMWT NRSRPLRSRS MRLPHCRVSD
201: ISLSRSHSTG HCVAEPVENL DRFTLRLPDG VRRRLIKKTL VRSSCGLYRS RSVGSRSKRS VFSEQWCNYK NHRRIHSMTL SFTDHLRVWL AGDVVAPPNS
301: EQSSRELRPD DLV
001: MVSFERNIRV LLQSVAYESS ETMVQPGTEI KASDLTLLVI TIILFAIFIV GLASVCFRWT SRQFYSQESI NPFTDSDVES RTSITAVRGL DEAIINSFPT
101: FLYSEVKERR IGIGGVECAV CICEFEDHET LRLMPECCHV FHADCVSVWL SDHSTCPLCR VDLCLQPGER SYLNPEPDLV ESTNSHLFDG VTWTNRNRPS
201: RSWSTRLSQC RVSQILISRS HSTGHSVVQP LDNLDRFTLR LPEEVRRQLT KKTVDNVAFS QARSSRRGYR SRSAGSERSV FSYQRRMHSF SDCAWSTSCG
301: GEAVAPSKDS RRISVEQSQL DDRV
101: FLYSEVKERR IGIGGVECAV CICEFEDHET LRLMPECCHV FHADCVSVWL SDHSTCPLCR VDLCLQPGER SYLNPEPDLV ESTNSHLFDG VTWTNRNRPS
201: RSWSTRLSQC RVSQILISRS HSTGHSVVQP LDNLDRFTLR LPEEVRRQLT KKTVDNVAFS QARSSRRGYR SRSAGSERSV FSYQRRMHSF SDCAWSTSCG
301: GEAVAPSKDS RRISVEQSQL DDRV
Arabidopsis Description
RING/U-box superfamily protein [Source:TAIR;Acc:AT2G34990]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.