Factsheet for GSMUA_Achr7P12810_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09280_001	Banana	cytosol	8.85	56.25
GSMUA_Achr10P...	Banana	plasma membrane	68.52	53.87
GSMUA_Achr5P17910_001	Banana	golgi, plasma membrane, vacuole	57.38	50.72
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	54.1	46.74
GSMUA_Achr3P20400_001	Banana	mitochondrion	50.49	44.77
GSMUA_Achr6P30500_001	Banana	plasma membrane	38.69	40.41
GSMUA_Achr9P15010_001	Banana	endoplasmic reticulum, plasma membrane	44.59	37.99
AT4G09100.1	Thale cress	extracellular	16.39	37.88
GSMUA_Achr3P06680_001	Banana	mitochondrion, plastid	47.87	37.63
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	37.38	33.93
KRH33975	Soybean	golgi, plasma membrane, vacuole	39.34	33.43
CDX75097	Canola	extracellular	14.75	32.61
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	39.02	32.34
CDY53236	Canola	plasma membrane	36.07	31.7
GSMUA_AchrUn_...	Banana	plastid	37.38	31.67
Bra009962.1-P	Field mustard	mitochondrion, plastid	29.51	31.47
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.15	31.25
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	31.15	31.25
CDX99986	Canola	plasma membrane	35.74	31.23
Bra038386.1-P	Field mustard	extracellular	14.1	31.16
CDY48058	Canola	extracellular	14.1	31.16
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	35.74	31.14
KRH68588	Soybean	plasma membrane	37.05	30.87
Bra036631.1-P	Field mustard	plasma membrane	35.41	30.86
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	40.0	30.65
CDY25038	Canola	plasma membrane	37.05	30.54
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	39.67	30.4
KRG96857	Soybean	vacuole	37.05	30.13
CDX80653	Canola	plasma membrane	29.84	30.03
CDX86163	Canola	plasma membrane	29.51	30.0
CDY05577	Canola	plasma membrane	37.38	29.84
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	33.11	29.71
Bra010641.1-P	Field mustard	extracellular, golgi	29.84	29.55
CDX90377	Canola	extracellular, golgi	29.84	29.55
Bra020591.1-P	Field mustard	plasma membrane	36.72	29.4
CDY39477	Canola	extracellular	29.84	29.35
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	32.13	29.34
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	40.33	29.29
Bra040642.1-P	Field mustard	plasma membrane	37.05	29.27
CDX82175	Canola	extracellular	22.3	29.06
CDY18787	Canola	plasma membrane	36.72	28.94
AT3G05200.1	Thale cress	plasma membrane	37.7	28.89
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	40.98	28.87
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	37.38	28.64
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	35.74	28.24
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plasma membrane	15.41	27.98
KRH72413	Soybean	cytosol, golgi, vacuole	33.44	27.27
GSMUA_Achr4P12270_001	Banana	plastid	15.41	27.17
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	28.52	26.93
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	33.44	26.91
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	31.48	26.74
AT4G09120.1	Thale cress	plasma membrane	29.84	26.38
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	33.77	26.34
AT1G35330.1	Thale cress	endoplasmic reticulum	27.87	25.91
CDY62007	Canola	golgi, plasma membrane	31.8	25.8
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	33.11	25.7
Bra040855.1-P	Field mustard	golgi, plasma membrane	31.48	25.53
CDY21367	Canola	golgi, plasma membrane	31.48	25.53
Bra012330.1-P	Field mustard	golgi, plasma membrane	28.52	25.29
CDX84270	Canola	cytosol, plastid, vacuole	25.57	24.92
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	29.84	24.73
CDY31657	Canola	extracellular, plasma membrane, plastid	29.84	24.73
CDX82176	Canola	extracellular	29.51	24.66
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	25.25	24.6
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	25.25	24.6
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	29.51	24.46
AT1G22500.1	Thale cress	plasma membrane	30.49	24.41
AT2G34990.2	Thale cress	plasma membrane	25.9	24.38
CDX82179	Canola	plasma membrane	27.87	24.22
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	29.84	24.07
AT1G72200.1	Thale cress	plasma membrane	31.8	24.01
Bra028075.1-P	Field mustard	plasma membrane	27.54	23.8
CDY03116	Canola	plasma membrane	27.54	23.8
CDY12022	Canola	plasma membrane	27.54	23.8
CDY70284	Canola	plasma membrane	30.16	23.65
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	26.23	23.6
CDX90713	Canola	extracellular, golgi, plasma membrane	25.9	23.3
Bra008016.1-P	Field mustard	plasma membrane	30.49	23.08
CDY03651	Canola	plasma membrane	30.49	23.08
Solyc12g087860.1.1	Tomato	vacuole	28.2	23.06
CDY05049	Canola	plasma membrane	21.97	22.95
KRH72412	Soybean	nucleus, plasma membrane, plastid	28.85	22.8
PGSC0003DMT400045807	Potato	plasma membrane	27.87	22.49
KRH16794	Soybean	plasma membrane	28.85	22.45
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	26.23	22.41
Bra008015.1-P	Field mustard	plasma membrane	28.85	22.22
CDY03652	Canola	plasma membrane	28.85	22.22
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	21.97	22.19
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	24.92	21.84
GSMUA_Achr1P17360_001	Banana	nucleus, plasma membrane, plastid	17.38	21.03
CDY70750	Canola	extracellular, mitochondrion, nucleus	20.33	20.46
GSMUA_Achr9P13810_001	Banana	golgi, mitochondrion, plastid, vacuole	23.61	19.57
CDY05145	Canola	plasma membrane	18.69	19.19
CDY12527	Canola	extracellular, plasma membrane, vacuole	14.75	18.91
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	14.75	18.91
CDY27787	Canola	extracellular, plasma membrane, vacuole	18.03	18.27
GSMUA_Achr3P05190_001	Banana	endoplasmic reticulum, golgi, plastid	22.62	17.97
GSMUA_Achr6P22700_001	Banana	plasma membrane	13.77	17.65
GSMUA_Achr9P00230_001	Banana	vacuole	20.33	16.85
GSMUA_Achr9P06250_001	Banana	endoplasmic reticulum, plasma membrane	20.0	16.62
GSMUA_Achr4P08120_001	Banana	plasma membrane	19.34	16.43
GSMUA_Achr6P26720_001	Banana	plasma membrane	18.36	15.95
CDY50446	Canola	mitochondrion	10.82	13.81

Protein Annotations

EnsemblPlants:GSMUA_Achr7P12810_001	EnsemblPlants:GSMUA_Achr7T12810_001	EnsemblPlantsGene:GSMUA_Achr7G12810_001	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF414	PFAM:PF13639	PFscan:PS50089
SEG:seg	SMART:SM00184	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI00029668B7	UniProt:M0TH18
MapMan:19.2.2.1.5.3.3	:	:	:	:	:

Description

Putative E3 ubiquitin-protein ligase ATL6 [Source:GMGC_GENE;Acc:GSMUA_Achr7G12810_001]

Coordinates

chr7:+:10310293..10311372

Molecular Weight (calculated)

33110.4 Da

IEP (calculated)

8.927

GRAVY (calculated)

-0.328

Length

305 amino acids

Sequence
(BLAST)

001: MSIVIIGMIS VFFCLGFLAI YIRSCTGDGG DLGVSSPRWA GGGFARSRRQ QGLKPEVLQT FPTLMYAEVK GLKAGKGALE CAVCLSEFED DEELRLLPHC
101: SHVFHPDCID AWLASHVTCP VCRANLAEQT TDGGLHPPFV AVPTAGNHPE SAALPQNHAR SRSGRRSPKF PRSHSTGHSV VRSVEDVDRY TLRLPEHIRK
201: EIFAARKLHR SASCGSSRGW WSFRPRKSDR WPPFFLRTLS VKVPAWVTGT KGEGECSVQK GEAEGSVKRR VAAVRTSLEC LGGGGGGGGG RDDDESPTSS
301: LTRQV

Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)

001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV

Arabidopsis Description

ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.