Factsheet for GSMUA_AchrUn_randomP15970_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09280_001	Banana	cytosol	6.94	52.08
AT4G09100.1	Thale cress	extracellular	15.28	41.67
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	38.89	39.66
GSMUA_Achr3P20400_001	Banana	mitochondrion	37.78	39.53
GSMUA_Achr7P12810_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	31.67	37.38
GSMUA_Achr6P30500_001	Banana	plasma membrane	29.72	36.64
CDX75097	Canola	extracellular	13.89	36.23
GSMUA_Achr5P17910_001	Banana	golgi, plasma membrane, vacuole	34.44	35.94
GSMUA_Achr10P...	Banana	plasma membrane	38.33	35.57
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	32.78	35.12
Bra038386.1-P	Field mustard	extracellular	13.33	34.78
CDY48058	Canola	extracellular	13.33	34.78
GSMUA_Achr9P15010_001	Banana	endoplasmic reticulum, plasma membrane	34.17	34.36
CDX82175	Canola	extracellular	22.22	34.19
GSMUA_Achr3P06680_001	Banana	mitochondrion, plastid	36.67	34.02
KRH33975	Soybean	golgi, plasma membrane, vacuole	32.78	32.87
Bra010641.1-P	Field mustard	extracellular, golgi	28.06	32.79
CDX90377	Canola	extracellular, golgi	28.06	32.79
CDY53236	Canola	plasma membrane	31.39	32.56
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	30.56	32.35
CDY39477	Canola	extracellular	27.78	32.26
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	32.78	32.07
KRH68588	Soybean	plasma membrane	32.22	31.69
KRG96857	Soybean	vacuole	32.5	31.2
Bra036631.1-P	Field mustard	plasma membrane	30.28	31.14
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	30.28	31.14
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	28.89	31.14
CDY25038	Canola	plasma membrane	31.94	31.08
KRH72413	Soybean	cytosol, golgi, vacuole	32.22	31.02
TraesCS4A01G104900.1	Wheat	mitochondrion	33.33	31.01
CDX86163	Canola	plasma membrane	25.83	31.0
CDX99986	Canola	plasma membrane	29.72	30.66
CDY05577	Canola	plasma membrane	32.5	30.63
Bra020591.1-P	Field mustard	plasma membrane	32.22	30.45
CDX80653	Canola	plasma membrane	25.56	30.36
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	31.94	30.34
GSMUA_Achr4P12270_001	Banana	plastid	14.44	30.06
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.28	29.93
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.28	29.93
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	26.67	29.72
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	32.78	29.65
Bra040642.1-P	Field mustard	plasma membrane	31.67	29.53
CDY18787	Canola	plasma membrane	31.67	29.46
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	32.5	29.4
Bra009962.1-P	Field mustard	mitochondrion, plastid	23.33	29.37
HORVU4Hr1G057610.1	Barley	plastid	33.61	29.37
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plasma membrane	13.61	29.17
AT3G05200.1	Thale cress	plasma membrane	31.94	28.89
CDX84270	Canola	cytosol, plastid, vacuole	25.0	28.75
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	33.33	28.57
TraesCS4D01G200100.1	Wheat	plastid	32.78	28.5
Zm00001d029395_P001	Maize	plasma membrane, plastid	30.0	28.2
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	31.11	28.14
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	24.44	28.11
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	24.44	28.11
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	33.61	27.94
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.44	27.46
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	29.44	27.11
CDY05049	Canola	plasma membrane	21.94	27.05
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.33	26.98
GSMUA_Achr1P17360_001	Banana	nucleus, plasma membrane, plastid	18.89	26.98
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.67	26.74
AT4G09120.1	Thale cress	plasma membrane	25.56	26.67
AT2G34990.2	Thale cress	plasma membrane	23.89	26.54
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	28.89	26.46
CDY70284	Canola	plasma membrane	28.33	26.22
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	31.67	26.21
TraesCS4B01G199100.1	Wheat	plastid	32.22	25.95
KXG39223	Sorghum	golgi, plasma membrane, plastid, vacuole	27.78	25.84
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	21.67	25.83
CDY31657	Canola	extracellular, plasma membrane, plastid	26.39	25.82
Bra008016.1-P	Field mustard	plasma membrane	28.89	25.81
CDY03651	Canola	plasma membrane	28.89	25.81
CDY62007	Canola	golgi, plasma membrane	26.94	25.8
AT1G72200.1	Thale cress	plasma membrane	28.89	25.74
AT1G35330.1	Thale cress	endoplasmic reticulum	23.33	25.61
Bra012330.1-P	Field mustard	golgi, plasma membrane	24.44	25.58
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	26.11	25.54
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	26.11	25.54
Bra040855.1-P	Field mustard	golgi, plasma membrane	26.67	25.53
CDY21367	Canola	golgi, plasma membrane	26.67	25.53
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	23.33	24.78
KRH16794	Soybean	plasma membrane	26.94	24.74
Solyc12g087860.1.1	Tomato	vacuole	25.56	24.66
CDX82176	Canola	extracellular	25.0	24.66
CDY12022	Canola	plasma membrane	24.17	24.65
CDX90713	Canola	extracellular, golgi, plasma membrane	23.06	24.48
Bra028075.1-P	Field mustard	plasma membrane	23.89	24.36
KRH72412	Soybean	nucleus, plasma membrane, plastid	26.11	24.35
CDX82179	Canola	plasma membrane	23.61	24.22
AT1G22500.1	Thale cress	plasma membrane	25.56	24.15
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	23.89	24.09
CDY03116	Canola	plasma membrane	23.61	24.08
PGSC0003DMT400045807	Potato	plasma membrane	25.28	24.07
Bra008015.1-P	Field mustard	plasma membrane	26.39	23.99
CDY03652	Canola	plasma membrane	26.39	23.99
GSMUA_Achr6P22700_001	Banana	plasma membrane	15.0	22.69
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	21.67	22.41
GSMUA_Achr9P13810_001	Banana	golgi, mitochondrion, plastid, vacuole	22.5	22.01
GSMUA_Achr3P05190_001	Banana	endoplasmic reticulum, golgi, plastid	22.5	21.09
GSMUA_Achr4P08120_001	Banana	plasma membrane	20.56	20.61
GSMUA_Achr9P00230_001	Banana	vacuole	20.56	20.11
GSMUA_Achr6P26720_001	Banana	plasma membrane	19.17	19.66
CDY70750	Canola	extracellular, mitochondrion, nucleus	16.39	19.47
CDY27787	Canola	extracellular, plasma membrane, vacuole	15.83	18.94
CDY05145	Canola	plasma membrane	15.28	18.52
GSMUA_Achr9P06250_001	Banana	endoplasmic reticulum, plasma membrane	18.61	18.26
CDY12527	Canola	extracellular, plasma membrane, vacuole	11.11	16.81
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.83	16.39
CDY50446	Canola	mitochondrion	8.89	13.39

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP15970_001	EnsemblPlants:GSMUA_AchrUn_randomT15970_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG15970_001	Gene3D:3.30.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155
PANTHER:PTHR14155:SF322	PFAM:PF13639	PFscan:PS50089	SEG:seg	SignalP:SignalP-noTM	SMART:SM00184
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0002961753	UniProt:M0U9K6	MapMan:19.2.2.1.5.3.3	:

Description

Putative E3 ubiquitin-protein ligase ATL6 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15970_001]

Coordinates

chrchrUn_random:-:75563273..75564562

Molecular Weight (calculated)

37725.6 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.161

Length

360 amino acids

Sequence
(BLAST)

001: MPPPMATSSR RATPATIHRT ASLLLIVLAL LLVTPRRVSA QSTATPSGDG PSGYSVRIKP GVAALVIGLI CGFFFLGFFA VYIHQCSSGS SGGTRPSGAV
101: ESRAAASRAA RRGLDPEVLA SFPTMAYAEA KEHKKGKGAL ECAVCLSEFA HDDTLRLLPR CCHVFHVDCI DVWLGTHVTC PVCRANLAEP EPADAADAAC
201: ESTPTEDVGA TVEGDLEGGR LPAVGYRRWH STGHKGEEVD RYTLRLPGHV RQEIFTAAGL RRAASVAEAR ARGEASGSRG YRGGRSGRWG FLLRTFSVRR
301: RADGTATEGS SKRVYPSAGA PLNLALEIGG GGAANSEPAK EEEAEAAASS SATPAATERV

Best Arabidopsis Sequence Match ( AT1G72200.1 )
(BLAST)

001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV

Arabidopsis Description

ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.