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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 100.0 100.0
Bra009962.1-P Field mustard mitochondrion, plastid 64.47 68.53
Bra036631.1-P Field mustard plasma membrane 64.14 55.71
Bra020591.1-P Field mustard plasma membrane 66.12 52.76
Bra040642.1-P Field mustard plasma membrane 53.62 42.23
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 52.96 41.71
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 38.82 33.91
Bra038386.1-P Field mustard extracellular 14.47 31.88
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 34.87 31.55
GSMUA_Achr6P30500_001 Banana plasma membrane 30.26 31.51
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 31.25 31.15
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 34.87 30.72
KRH33975 Soybean golgi, plasma membrane, vacuole 36.18 30.64
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 13.82 29.58
Bra010641.1-P Field mustard extracellular, golgi 29.93 29.55
KRG96857 Soybean vacuole 35.86 29.07
Zm00001d005936_P001 Maize plasma membrane 37.5 29.01
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 20.07 28.77
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 33.55 28.49
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 37.17 28.39
KRH68588 Soybean plasma membrane 33.88 28.14
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 36.51 27.89
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 35.86 27.81
GSMUA_AchrUn_... Banana golgi, plasma membrane 32.24 27.76
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 30.92 27.73
Zm00001d020789_P001 Maize plasma membrane 36.18 27.64
EER99041 Sorghum endoplasmic reticulum, plasma membrane 37.17 27.43
Os09t0468300-00 Rice golgi, plasma membrane 34.87 27.39
TraesCS5B01G245800.1 Wheat plasma membrane 35.53 27.27
TraesCS5A01G248100.1 Wheat plasma membrane 35.53 27.2
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 37.5 27.14
GSMUA_Achr10P... Banana plasma membrane 34.54 27.06
PGSC0003DMT400073575 Potato extracellular, plasma membrane 38.49 27.02
HORVU5Hr1G069980.1 Barley plasma membrane 33.88 26.82
GSMUA_Achr3P20400_001 Banana mitochondrion 30.26 26.74
Bra013268.1-P Field mustard plasma membrane 25.66 26.53
Bra012330.1-P Field mustard golgi, plasma membrane 29.61 26.16
Bra025008.1-P Field mustard plastid 24.67 26.13
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 33.22 26.03
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 30.59 25.91
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 23.68 25.62
Bra005375.1-P Field mustard cytosol, nucleus, plastid 26.32 25.56
Bra008016.1-P Field mustard plasma membrane 33.88 25.56
TraesCS3D01G495500.1 Wheat vacuole 32.24 25.39
GSMUA_AchrUn_... Banana plastid 29.93 25.28
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 30.59 25.27
Bra040855.1-P Field mustard golgi, plasma membrane 30.92 25.0
Bra028075.1-P Field mustard plasma membrane 28.62 24.65
HORVU4Hr1G080840.1 Barley cytosol 18.75 24.05
Os08t0484200-01 Rice golgi 32.57 23.97
TraesCS3B01G549900.1 Wheat vacuole 24.67 23.81
Bra008015.1-P Field mustard plasma membrane 30.92 23.74
TraesCS4B01G304400.1 Wheat plasma membrane 27.63 23.66
TraesCS4A01G404600.1 Wheat plasma membrane 27.63 23.66
HORVU4Hr1G078260.1 Barley plasma membrane 27.63 23.53
TraesCS4D01G302600.1 Wheat plasma membrane 27.3 23.38
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 30.92 23.27
Os03t0188200-01 Rice golgi 26.97 23.23
TraesCS6D01G113000.1 Wheat golgi 30.26 22.94
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 30.59 22.91
EES18560 Sorghum golgi, plasma membrane 29.61 22.9
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 30.26 22.77
TraesCS4A01G104900.1 Wheat mitochondrion 28.29 22.22
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 30.26 21.85
TraesCS4D01G200100.1 Wheat plastid 29.61 21.74
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.95 21.73
HORVU4Hr1G057610.1 Barley plastid 29.28 21.6
Zm00001d031261_P001 Maize golgi 26.64 21.49
Zm00001d018122_P001 Maize vacuole 29.61 21.48
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 29.28 21.45
TraesCS7B01G081700.1 Wheat golgi 28.95 21.26
EER92732 Sorghum golgi 25.66 21.2
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.96 21.14
TraesCS7D01G178000.1 Wheat golgi 28.29 21.08
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 30.59 21.04
TraesCS7A01G176700.1 Wheat golgi 28.62 20.96
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.63 20.74
Zm00001d048230_P001 Maize golgi 25.66 20.53
HORVU6Hr1G077610.1 Barley plasma membrane 27.3 20.44
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 29.28 20.37
OQU85775 Sorghum golgi, plasma membrane, vacuole 28.29 20.33
Zm00001d027983_P001 Maize plasma membrane, plastid 24.01 20.17
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 24.67 19.38
Zm00001d029395_P001 Maize plasma membrane, plastid 24.34 19.32
TraesCS4B01G199100.1 Wheat plastid 28.29 19.24
Os03t0391100-00 Rice endoplasmic reticulum, golgi 26.32 18.39
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 24.34 17.79
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 30.59 17.06
Bra005343.1-P Field mustard plastid 15.13 16.49
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 22.37 16.19
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 21.05 15.84
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 21.71 15.71
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 21.38 15.59
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 15.13 13.69
Bra012630.1-P Field mustard nucleus 24.34 11.95
Protein Annotations
EnsemblPlants:Bra009960.1EnsemblPlants:Bra009960.1-PEnsemblPlantsGene:Bra009960Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF263PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI000253F4B3UniProt:M4D0G2MapMan:19.2.2.1.5.3.3:
Description
AT5G27420 (E=2e-086) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA06:-:18311438..18312352
Molecular Weight (calculated)
34187.0 Da
IEP (calculated)
6.840
GRAVY (calculated)
-0.265
Length
304 amino acids
Sequence
(BLAST)
001: MKSFLPLTIK QTALPALVLF LLLAMSELAS SQPGLEDPNK PYDYSRTLTM YLVIMIIAMP FVYFSLYIRH CREAADGSVN HLVGERRMTN ATAAHGLDAS
101: VIETFPTFIY SEVKTQKIGN GALECAICLN EFQDDETLRL LPKCDHVFHP HCIGAWLQGH VTCPVCRTNL ADQRQTTEPV EPEVITETDV ESQQTVIHEP
201: AVEQGESVGR VKFSRSHTTG HSVVLSGECT DRFTLRLPDD LRNKLLASGK MTRSKSLLNL PRSTGKPVDR SLDRWDQWLF IKTPPFRWQS QDDGSIRRGR
301: GDSI
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.