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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G104900.1 Wheat mitochondrion 51.95 58.4
TraesCS4D01G200100.1 Wheat plastid 55.17 57.97
HORVU4Hr1G057610.1 Barley plastid 54.48 57.52
TraesCS4B01G199100.1 Wheat plastid 55.17 53.69
Zm00001d029395_P001 Maize plasma membrane, plastid 45.75 51.96
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 45.75 51.42
AT4G09100.1 Thale cress extracellular 12.41 40.91
CDX75097 Canola extracellular 11.26 35.51
Bra038386.1-P Field mustard extracellular 11.03 34.78
CDY48058 Canola extracellular 11.03 34.78
GSMUA_AchrUn_... Banana plastid 26.21 31.67
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 24.14 31.25
Os10t0574400-01 Rice mitochondrion, plasma membrane, plastid 13.56 29.65
KRH33975 Soybean golgi, plasma membrane, vacuole 24.14 29.25
CDX82175 Canola extracellular 15.63 29.06
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 22.3 29.04
CDY53236 Canola plasma membrane 22.99 28.82
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 25.06 28.76
KRH72413 Soybean cytosol, golgi, vacuole 24.6 28.61
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 22.76 28.29
Os09t0468300-00 Rice golgi, plasma membrane 25.06 28.17
CDY39477 Canola extracellular 20.0 28.06
CDX80653 Canola plasma membrane 19.54 28.05
Bra036631.1-P Field mustard plasma membrane 22.53 28.0
Bra010641.1-P Field mustard extracellular, golgi 19.77 27.92
CDX90377 Canola extracellular, golgi 19.77 27.92
CDX86163 Canola plasma membrane 19.08 27.67
Os08t0484200-01 Rice golgi 26.21 27.6
CDX99986 Canola plasma membrane 22.07 27.51
CDY31657 Canola extracellular, plasma membrane, plastid 23.22 27.45
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 22.99 27.17
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 21.15 27.06
Os03t0188200-01 Rice golgi 21.84 26.91
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 22.76 26.9
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 22.76 26.9
CDY18787 Canola plasma membrane 23.91 26.87
CDY05049 Canola plasma membrane 17.93 26.71
Bra040642.1-P Field mustard plasma membrane 23.68 26.68
Os02t0572200-01 Rice plasma membrane 21.38 26.65
Bra009962.1-P Field mustard mitochondrion, plastid 17.47 26.57
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 21.84 26.46
KRG96857 Soybean vacuole 22.76 26.4
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 18.39 26.32
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 18.39 26.32
KRH68588 Soybean plasma membrane 21.84 25.96
CDY25038 Canola plasma membrane 22.07 25.95
CDY05577 Canola plasma membrane 22.76 25.92
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 19.08 25.7
AT3G05200.1 Thale cress plasma membrane 23.45 25.63
Bra020591.1-P Field mustard plasma membrane 22.07 25.2
CDY70284 Canola plasma membrane 22.53 25.19
Os04t0450300-00 Rice endoplasmic reticulum, golgi 19.54 25.07
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 17.24 24.83
Bra008016.1-P Field mustard plasma membrane 22.99 24.81
CDY03651 Canola plasma membrane 22.99 24.81
AT2G34990.2 Thale cress plasma membrane 18.39 24.69
CDX82176 Canola extracellular 20.69 24.66
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 22.53 24.62
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 21.84 24.61
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 21.38 24.6
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 23.68 24.52
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 19.08 24.48
AT1G35330.1 Thale cress endoplasmic reticulum 18.39 24.39
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 22.3 24.37
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 24.6 24.21
CDX90713 Canola extracellular, golgi, plasma membrane 18.85 24.19
AT1G72200.1 Thale cress plasma membrane 22.3 24.01
Bra040855.1-P Field mustard golgi, plasma membrane 20.69 23.94
CDY21367 Canola golgi, plasma membrane 20.69 23.94
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 21.84 23.87
AT4G09120.1 Thale cress plasma membrane 18.85 23.77
CDY62007 Canola golgi, plasma membrane 20.46 23.67
CDX82179 Canola plasma membrane 18.85 23.36
AT1G22500.1 Thale cress plasma membrane 20.46 23.36
Bra012330.1-P Field mustard golgi, plasma membrane 18.39 23.26
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 19.08 23.25
Bra008015.1-P Field mustard plasma membrane 21.15 23.23
CDY03652 Canola plasma membrane 21.15 23.23
PGSC0003DMT400073575 Potato extracellular, plasma membrane 22.99 23.09
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 20.46 22.76
Bra005375.1-P Field mustard cytosol, nucleus, plastid 16.32 22.68
CDX84270 Canola cytosol, plastid, vacuole 16.32 22.68
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 16.32 22.68
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 20.46 22.65
KRH16794 Soybean plasma membrane 20.0 22.19
KRH72412 Soybean nucleus, plasma membrane, plastid 19.54 22.02
CDY12022 Canola plasma membrane 17.47 21.53
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 21.61 21.51
CDY03116 Canola plasma membrane 17.24 21.25
Bra028075.1-P Field mustard plasma membrane 17.01 20.96
PGSC0003DMT400045807 Potato plasma membrane 18.16 20.9
Solyc12g087860.1.1 Tomato vacuole 17.47 20.38
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 16.09 20.11
Os02t0572300-00 Rice nucleus, plastid 18.62 19.38
Os05t0596500-01 Rice endoplasmic reticulum, plasma membrane 16.09 18.18
Os06t0695900-01 Rice endoplasmic reticulum, vacuole 15.4 16.79
CDY27787 Canola extracellular, plasma membrane, vacuole 11.49 16.61
CDY70750 Canola extracellular, mitochondrion, nucleus 11.49 16.5
CDY05145 Canola plasma membrane 11.26 16.5
CDY12527 Canola extracellular, plasma membrane, vacuole 8.05 14.71
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 7.82 14.29
CDY50446 Canola mitochondrion 7.59 13.81
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10UniProt:A0A0P0VZ59ProteinID:BAS84523.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0043161
GO:GO:0061630InterPro:IPR001841InterPro:IPR013083EnsemblPlantsGene:Os03g0391100EnsemblPlants:Os03t0391100-00PFAM:PF13639
PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF322SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI0003938935InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
Zinc finger, RING-type domain containing protein. (Os03t0391100-00)
Coordinates
chr3:+:15668225..15671064
Molecular Weight (calculated)
45164.3 Da
IEP (calculated)
10.748
GRAVY (calculated)
0.053
Length
435 amino acids
Sequence
(BLAST)
001: MAPTTTCQRI LLLLLLLLLL AIARPASSQL FTPAPPPPVQ AADGGGSAGF NVATSLLFVG VVIALFLLGF FSAYLRRCSE AATAAHRLRG GGGGGAVHAS
101: AAVAAAAAAA FAGSAGRRRG RAGLDVAAME ALPVLTYATA RAVKAGRGAL ECAVCLAEFA DGGEKLRLLP GCCHVFHAAC IDVWLAAHVT CPVCRADLAD
201: PAVAAAGHVL AADLAAQAEA PNHTVVNVDT PESTIGKDSP SDQQPPESLT AEERVDRYTL RLPERLKREI EEAKLLRRSV SAVTAPAAAS SGRWASAAGG
301: GRGGRRRGLR WRRPRPAMAR TPAEAAAGDN ADGDGGRGGR RRVLRRRSQR ATAWPRSAAE VAAGDAGGGR GRPWRSRTTT RNNSLMLMCV EPTVGQSFLA
401: GQIWLVEGGF WPARWLSHPV GEAVGGCFFV GMAKI
Best Arabidopsis Sequence Match ( AT1G72200.1 )
(BLAST)
001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
Arabidopsis Description
ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.