Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39477 | Canola | extracellular | 68.11 | 70.97 |
| CDX90377 | Canola | extracellular, golgi | 67.18 | 70.45 |
| Bra010641.1-P | Field mustard | extracellular, golgi | 66.87 | 70.13 |
| AT4G09100.1 | Thale cress | extracellular | 14.86 | 36.36 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 36.84 | 30.36 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 36.84 | 30.05 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 35.6 | 29.95 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 36.53 | 29.72 |
| Zm00001d005936_P001 | Maize | plasma membrane | 35.91 | 29.52 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 35.29 | 29.46 |
| AT3G05200.1 | Thale cress | plasma membrane | 36.22 | 29.4 |
| Zm00001d020789_P001 | Maize | plasma membrane | 36.22 | 29.4 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 26.01 | 28.77 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 36.53 | 28.64 |
| AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 32.51 | 28.53 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 26.93 | 28.52 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 33.75 | 28.24 |
| AT2G34990.2 | Thale cress | plasma membrane | 28.17 | 28.09 |
| AT4G09120.1 | Thale cress | plasma membrane | 29.72 | 27.83 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 29.41 | 27.54 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 29.1 | 27.33 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 29.72 | 27.2 |
| AT1G35330.1 | Thale cress | endoplasmic reticulum | 27.55 | 27.13 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 26.32 | 26.98 |
| AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 31.27 | 26.72 |
| EES18560 | Sorghum | golgi, plasma membrane | 32.51 | 26.72 |
| GSMUA_AchrUn_... | Banana | plastid | 29.72 | 26.67 |
| AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 24.77 | 26.49 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 17.34 | 26.42 |
| AT5G46650.1 | Thale cress | plasma membrane | 23.53 | 26.3 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 31.58 | 26.29 |
| Os08t0484200-01 | Rice | golgi | 33.44 | 26.15 |
| Zm00001d031261_P001 | Maize | golgi | 30.34 | 25.99 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 28.48 | 25.7 |
| AT1G72200.1 | Thale cress | plasma membrane | 31.58 | 25.25 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 31.58 | 25.25 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 31.58 | 25.25 |
| TraesCS6D01G113000.1 | Wheat | golgi | 31.27 | 25.19 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 31.58 | 25.12 |
| AT4G17920.1 | Thale cress | plasma membrane | 22.29 | 24.91 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 18.27 | 24.89 |
| AT2G27940.1 | Thale cress | plasma membrane | 18.27 | 24.89 |
| AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 27.24 | 24.65 |
| AT1G22500.1 | Thale cress | plasma membrane | 28.79 | 24.41 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 26.32 | 23.81 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 30.65 | 23.52 |
| Os03t0188200-01 | Rice | golgi | 25.39 | 23.23 |
| AT2G35420.1 | Thale cress | plasma membrane, plastid | 18.27 | 23.23 |
| GSMUA_Achr10P... | Banana | plasma membrane | 27.86 | 23.2 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 28.79 | 22.91 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 25.08 | 22.82 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 25.08 | 22.82 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 25.08 | 22.82 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.48 | 22.72 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.48 | 22.72 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 29.72 | 22.7 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 29.1 | 22.65 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.17 | 22.64 |
| EER92732 | Sorghum | golgi | 25.7 | 22.55 |
| Zm00001d018122_P001 | Maize | vacuole | 29.1 | 22.43 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 30.34 | 22.43 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 24.46 | 21.82 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 26.01 | 21.71 |
| TraesCS7D01G178000.1 | Wheat | golgi | 26.93 | 21.32 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 29.1 | 21.27 |
| TraesCS7B01G081700.1 | Wheat | golgi | 27.24 | 21.26 |
| Zm00001d048230_P001 | Maize | golgi | 24.77 | 21.05 |
| TraesCS7A01G176700.1 | Wheat | golgi | 26.93 | 20.96 |
| TraesCS4D01G200100.1 | Wheat | plastid | 26.32 | 20.53 |
| HORVU4Hr1G057610.1 | Barley | plastid | 26.01 | 20.39 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 24.15 | 20.37 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 25.7 | 19.08 |
| TraesCS4B01G199100.1 | Wheat | plastid | 26.01 | 18.79 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 22.29 | 18.6 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 30.34 | 17.98 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 21.05 | 17.44 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 22.29 | 17.31 |
| AT5G05810.1 | Thale cress | endoplasmic reticulum, golgi | 20.43 | 16.22 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 21.36 | 15.97 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EntrezGene:830170 | UniProt:A0A178UZZ5 | ProteinID:AEE87164.1 | EMBL:AF419600 |
| ArrayExpress:AT4G40070 | EnsemblPlantsGene:AT4G40070 | RefSeq:AT4G40070 | TAIR:AT4G40070 | RefSeq:AT4G40070-TAIR-G | EnsemblPlants:AT4G40070.1 |
| TAIR:AT4G40070.1 | EMBL:BT000540 | ProteinID:CAB38920.2 | ProteinID:CAB80670.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_568080.2 |
| ProteinID:OAO98372.1 | PFAM:PF13639 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020100 | PO:PO:0020137 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | UniProt:Q8W571 |
| SMART:SM00184 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI00005DC270 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
ATL32RING-H2 finger protein ATL32 [Source:UniProtKB/Swiss-Prot;Acc:Q8W571]
Coordinates
chr4:+:18576216..18577774
Molecular Weight (calculated)
36071.7 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.429
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTRVECFNP HRWIILHVAI IIQSKANAQS FSPSPPDLQT GHTPSKTTVF AVLVTLFFLT GLLSVYIRHC ARSNPDSSTR YFRNRANDGS SRRGGLDNAV
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.