Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 5
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000673.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 68.35 | 71.98 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 68.07 | 71.68 |
| CDY05049 | Canola | plasma membrane | 57.7 | 70.55 |
| AT4G09120.1 | Thale cress | plasma membrane | 65.55 | 67.83 |
| AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 56.02 | 66.23 |
| AT1G35330.1 | Thale cress | endoplasmic reticulum | 45.94 | 50.0 |
| AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 39.5 | 37.3 |
| AT4G09100.1 | Thale cress | extracellular | 13.73 | 37.12 |
| AT2G34990.2 | Thale cress | plasma membrane | 33.61 | 37.04 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 27.17 | 28.12 |
| AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 24.65 | 27.24 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 26.05 | 27.03 |
| AT1G22500.1 | Thale cress | plasma membrane | 28.57 | 26.77 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 21.85 | 26.71 |
| AT3G05200.1 | Thale cress | plasma membrane | 29.69 | 26.63 |
| AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.45 | 26.63 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 28.85 | 26.61 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 26.05 | 26.35 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 22.41 | 26.23 |
| Zm00001d005936_P001 | Maize | plasma membrane | 28.57 | 25.95 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 17.09 | 25.74 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 27.73 | 25.52 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 25.49 | 25.42 |
| Zm00001d020789_P001 | Maize | plasma membrane | 28.29 | 25.38 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 26.89 | 25.0 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 28.57 | 24.76 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 27.17 | 24.74 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 14.57 | 24.53 |
| AT1G72200.1 | Thale cress | plasma membrane | 27.45 | 24.26 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 26.89 | 24.24 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 26.89 | 24.18 |
| GSMUA_AchrUn_... | Banana | plastid | 24.09 | 23.89 |
| GSMUA_Achr10P... | Banana | plasma membrane | 25.77 | 23.71 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 27.45 | 23.61 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 26.61 | 23.51 |
| TraesCS6D01G113000.1 | Wheat | golgi | 26.33 | 23.44 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 25.21 | 23.32 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 26.33 | 23.27 |
| AT5G46650.1 | Thale cress | plasma membrane | 18.77 | 23.18 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 26.05 | 22.91 |
| Zm00001d031261_P001 | Maize | golgi | 24.09 | 22.81 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 26.89 | 22.7 |
| Zm00001d018122_P001 | Maize | vacuole | 26.61 | 22.67 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 25.77 | 22.66 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 19.89 | 22.54 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 22.41 | 22.54 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 22.41 | 22.54 |
| AT4G17920.1 | Thale cress | plasma membrane | 18.21 | 22.49 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 25.49 | 22.47 |
| Os03t0188200-01 | Rice | golgi | 22.13 | 22.38 |
| Os08t0484200-01 | Rice | golgi | 25.77 | 22.28 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 25.21 | 22.22 |
| EES18560 | Sorghum | golgi, plasma membrane | 24.37 | 22.14 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 22.13 | 22.13 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 21.85 | 21.97 |
| TraesCS7D01G178000.1 | Wheat | golgi | 24.93 | 21.81 |
| TraesCS7B01G081700.1 | Wheat | golgi | 25.21 | 21.74 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.37 | 21.64 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 25.49 | 21.62 |
| TraesCS7A01G176700.1 | Wheat | golgi | 24.93 | 21.45 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.49 | 20.82 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 21.01 | 20.72 |
| EER92732 | Sorghum | golgi | 21.29 | 20.65 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 25.49 | 20.59 |
| Zm00001d048230_P001 | Maize | golgi | 21.85 | 20.53 |
| HORVU4Hr1G057610.1 | Barley | plastid | 23.25 | 20.15 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 21.57 | 19.9 |
| TraesCS4D01G200100.1 | Wheat | plastid | 22.97 | 19.81 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 20.73 | 19.12 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 23.25 | 19.08 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 20.45 | 19.06 |
| AT2G35420.1 | Thale cress | plasma membrane, plastid | 13.45 | 18.9 |
| AT2G27940.1 | Thale cress | plasma membrane | 12.32 | 18.57 |
| TraesCS4B01G199100.1 | Wheat | plastid | 22.69 | 18.12 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 20.45 | 17.55 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 25.77 | 16.88 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 16.81 | 15.38 |
| AT5G05810.1 | Thale cress | endoplasmic reticulum, golgi | 16.53 | 14.5 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 16.53 | 13.66 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EntrezGene:826491 | EMBL:AC005359 | ProteinID:AEE82725.1 | ArrayExpress:AT4G09130 |
| EnsemblPlantsGene:AT4G09130 | RefSeq:AT4G09130 | TAIR:AT4G09130 | RefSeq:AT4G09130-TAIR-G | EnsemblPlants:AT4G09130.1 | TAIR:AT4G09130.1 |
| Unigene:At.54226 | ProteinID:CAB78037.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0046872 |
| GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_192652.1 | PFAM:PF13639 | PFscan:PS50089 |
| PANTHER:PTHR14155 | PANTHER:PTHR14155:SF208 | UniProt:Q9M0R4 | SMART:SM00184 | SMART:SM01197 | SUPFAM:SSF57850 |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000009D555 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
ATL37Putative RING-H2 finger protein ATL37 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R4]
Coordinates
chr4:+:5815775..5816922
Molecular Weight (calculated)
40003.5 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.354
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIFTRDFSH RILACVLLPL FLFQCLPYVT CQQGSESAGR NGKSKESSII GIVLLSLFLL LLVVYCLNYG CCIEENETGG HEVLHSRVRR GIDKDVIESF
101: PAFLYSEVKA FKIGNGGVEC AICLCEFEDE EPLRWMPPCS HTFHANCIDE WLSSRSTCPV CRANLSLKSG DSFPHPSMDV ETGNAQRGVQ ESPDERSLTG
201: SSVTCNNNAN YTTPRSRSTG LLSSWHVPEL FLPRSHSTGH SLVQPCQNID RFTLQLPEEV QRQLVSLNLI KRSHIALPRA RSSRQGYRSG SVGNERTGFS
301: QGRQTLRRAI STSLSFSFQP APVRSTLDRD NLMRETSQAN DKDFGERSFQ RLMPEKN
101: PAFLYSEVKA FKIGNGGVEC AICLCEFEDE EPLRWMPPCS HTFHANCIDE WLSSRSTCPV CRANLSLKSG DSFPHPSMDV ETGNAQRGVQ ESPDERSLTG
201: SSVTCNNNAN YTTPRSRSTG LLSSWHVPEL FLPRSHSTGH SLVQPCQNID RFTLQLPEEV QRQLVSLNLI KRSHIALPRA RSSRQGYRSG SVGNERTGFS
301: QGRQTLRRAI STSLSFSFQP APVRSTLDRD NLMRETSQAN DKDFGERSFQ RLMPEKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.