Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000673.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 97.05 | 97.05 |
| CDY05049 | Canola | plasma membrane | 78.47 | 91.1 |
| AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 71.68 | 68.07 |
| AT4G09120.1 | Thale cress | plasma membrane | 66.37 | 65.22 |
| AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 56.93 | 63.91 |
| CDY03116 | Canola | plasma membrane | 48.67 | 46.74 |
| CDY12022 | Canola | plasma membrane | 48.67 | 46.74 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 39.82 | 36.68 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 39.23 | 36.14 |
| CDY31686 | Canola | nucleus | 10.03 | 32.38 |
| CDX80653 | Canola | plasma membrane | 28.02 | 31.35 |
| CDX75097 | Canola | extracellular | 12.68 | 31.16 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.73 | 30.92 |
| CDY48058 | Canola | extracellular | 12.39 | 30.43 |
| CDX86163 | Canola | plasma membrane | 25.96 | 29.33 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.09 | 29.14 |
| CDX99986 | Canola | plasma membrane | 29.79 | 28.94 |
| CDY53236 | Canola | plasma membrane | 29.2 | 28.53 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 25.96 | 28.11 |
| CDY62007 | Canola | golgi, plasma membrane | 30.97 | 27.93 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 25.66 | 27.8 |
| CDY21367 | Canola | golgi, plasma membrane | 30.68 | 27.66 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 28.02 | 27.54 |
| CDX90377 | Canola | extracellular, golgi | 24.78 | 27.27 |
| CDY70284 | Canola | plasma membrane | 31.27 | 27.25 |
| CDY39477 | Canola | extracellular | 24.78 | 27.1 |
| CDX82175 | Canola | extracellular | 18.58 | 26.92 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 23.01 | 26.71 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 27.73 | 26.63 |
| CDX82176 | Canola | extracellular | 28.61 | 26.58 |
| CDY25038 | Canola | plasma membrane | 28.91 | 26.49 |
| CDY05577 | Canola | plasma membrane | 29.79 | 26.44 |
| CDY03651 | Canola | plasma membrane | 31.27 | 26.3 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 26.55 | 26.16 |
| CDY18787 | Canola | plasma membrane | 29.79 | 26.1 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 23.3 | 25.9 |
| CDX82179 | Canola | plasma membrane | 26.55 | 25.64 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 29.2 | 25.58 |
| Zm00001d005936_P001 | Maize | plasma membrane | 29.5 | 25.45 |
| CDY62419 | Canola | cytosol | 11.21 | 25.33 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 28.91 | 25.26 |
| CDY03652 | Canola | plasma membrane | 29.2 | 25.0 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 30.38 | 25.0 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 28.91 | 25.0 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 26.25 | 24.86 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 28.91 | 24.69 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 28.61 | 24.49 |
| CDY05713 | Canola | extracellular | 10.62 | 24.49 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 17.11 | 24.47 |
| Zm00001d020789_P001 | Maize | plasma membrane | 28.61 | 24.37 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 27.43 | 24.22 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 20.06 | 23.69 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 20.06 | 23.69 |
| GSMUA_Achr10P... | Banana | plasma membrane | 26.84 | 23.45 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.73 | 23.24 |
| CDY35174 | Canola | plasma membrane | 19.17 | 23.13 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 26.25 | 23.06 |
| GSMUA_AchrUn_... | Banana | plastid | 24.48 | 23.06 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 28.02 | 22.89 |
| CDX78812 | Canola | plasma membrane | 19.76 | 22.79 |
| CDY44502 | Canola | plasma membrane | 19.76 | 22.79 |
| CDY03202 | Canola | plasma membrane | 18.88 | 22.78 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 27.14 | 22.77 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 27.14 | 22.77 |
| TraesCS6D01G113000.1 | Wheat | golgi | 26.84 | 22.69 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 15.93 | 22.69 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 26.55 | 22.17 |
| Os03t0188200-01 | Rice | golgi | 23.01 | 22.1 |
| Zm00001d031261_P001 | Maize | golgi | 24.48 | 22.02 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 27.43 | 21.99 |
| Zm00001d018122_P001 | Maize | vacuole | 27.14 | 21.96 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 20.35 | 21.9 |
| CDY01502 | Canola | plasma membrane | 19.17 | 21.89 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 15.34 | 21.85 |
| CDY50446 | Canola | mitochondrion | 15.34 | 21.76 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 13.57 | 21.7 |
| EES18560 | Sorghum | golgi, plasma membrane | 25.07 | 21.63 |
| Os08t0484200-01 | Rice | golgi | 25.96 | 21.31 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 22.12 | 21.13 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 22.12 | 21.01 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 21.83 | 20.85 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 24.78 | 20.69 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.48 | 20.65 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 21.53 | 20.56 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.48 | 20.49 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.19 | 20.25 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 25.07 | 20.19 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 23.01 | 20.16 |
| HORVU4Hr1G057610.1 | Barley | plastid | 24.48 | 20.15 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.66 | 19.91 |
| TraesCS4D01G200100.1 | Wheat | plastid | 24.19 | 19.81 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 20.94 | 19.61 |
| EER92732 | Sorghum | golgi | 21.24 | 19.57 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 25.37 | 19.46 |
| TraesCS7D01G178000.1 | Wheat | golgi | 23.3 | 19.36 |
| TraesCS7B01G081700.1 | Wheat | golgi | 23.6 | 19.32 |
| TraesCS7A01G176700.1 | Wheat | golgi | 23.3 | 19.04 |
| Zm00001d048230_P001 | Maize | golgi | 21.24 | 18.95 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 24.19 | 18.85 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 16.81 | 18.81 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 21.24 | 18.6 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 20.35 | 18.02 |
| TraesCS4B01G199100.1 | Wheat | plastid | 23.6 | 17.9 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 14.75 | 16.61 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 26.55 | 16.51 |
| CDY05145 | Canola | plasma membrane | 14.45 | 16.5 |
| CDY13888 | Canola | plasma membrane | 17.4 | 15.95 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 18.88 | 15.38 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.81 | 15.36 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.11 | 15.14 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 15.34 | 14.73 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.11 | 14.22 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 17.11 | 14.18 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 17.4 | 14.15 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 17.11 | 13.91 |
| CDX70126 | Canola | plasma membrane | 16.22 | 13.65 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 16.52 | 13.33 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 16.22 | 13.25 |
| CDX90435 | Canola | nucleus | 19.17 | 10.59 |
| CDY05714 | Canola | cytosol | 3.83 | 6.1 |
| CDY31685 | Canola | cytosol | 0.29 | 4.55 |
Protein Annotations
| EnsemblPlants:CDX90713 | EnsemblPlantsGene:GSBRNA2T00151389001 | Gene3D:3.30.40.10 | GO:A0A078DU65 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF208 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX90713 | ProteinID:CDX90713.1 | SEG:seg | SignalP:SignalP-TM | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI0004EED036 | MapMan:19.2.2.1.5.3.3 | : | : | : |
Description
BnaA03g23930D
Coordinates
chrLK031864:+:105974..106993
Molecular Weight (calculated)
38081.4 Da
IEP (calculated)
8.172
GRAVY (calculated)
-0.322
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIFRRDLSH RFVLCVLLPL FIFQFLPNAT CQQQSESKAR AESVIGIVLL SMFLLCIVGC CFFYACQSAE VESGSRQVLH TRARHGLDKD IIESFPFFLY
101: SEIKGLKIGK GGVECAICLN EFDDEETLRW MPPCSHTFHA SCIDVWLSSW STCPVCRVNL SLKPGESFPY PSMDLETGNV QRGVQESPDD ISLTGNNTSN
201: YTTPRSRSTG LLSSWRMAEM FVPRSHSTGR SVVQIGENLD RFTLQLPDEV QRQLASLHPT RKSHMALPEA RSSRQGYRSG SVGSESSSFS QGRQTFRRAL
301: SMSFSSGRST LGKHVRETSQ TKDKDSGERS FERLMPEKV
101: SEIKGLKIGK GGVECAICLN EFDDEETLRW MPPCSHTFHA SCIDVWLSSW STCPVCRVNL SLKPGESFPY PSMDLETGNV QRGVQESPDD ISLTGNNTSN
201: YTTPRSRSTG LLSSWRMAEM FVPRSHSTGR SVVQIGENLD RFTLQLPDEV QRQLASLHPT RKSHMALPEA RSSRQGYRSG SVGSESSSFS QGRQTFRRAL
301: SMSFSSGRST LGKHVRETSQ TKDKDSGERS FERLMPEKV
001: MTIFTRDFSH RILACVLLPL FLFQCLPYVT CQQGSESAGR NGKSKESSII GIVLLSLFLL LLVVYCLNYG CCIEENETGG HEVLHSRVRR GIDKDVIESF
101: PAFLYSEVKA FKIGNGGVEC AICLCEFEDE EPLRWMPPCS HTFHANCIDE WLSSRSTCPV CRANLSLKSG DSFPHPSMDV ETGNAQRGVQ ESPDERSLTG
201: SSVTCNNNAN YTTPRSRSTG LLSSWHVPEL FLPRSHSTGH SLVQPCQNID RFTLQLPEEV QRQLVSLNLI KRSHIALPRA RSSRQGYRSG SVGNERTGFS
301: QGRQTLRRAI STSLSFSFQP APVRSTLDRD NLMRETSQAN DKDFGERSFQ RLMPEKN
101: PAFLYSEVKA FKIGNGGVEC AICLCEFEDE EPLRWMPPCS HTFHANCIDE WLSSRSTCPV CRANLSLKSG DSFPHPSMDV ETGNAQRGVQ ESPDERSLTG
201: SSVTCNNNAN YTTPRSRSTG LLSSWHVPEL FLPRSHSTGH SLVQPCQNID RFTLQLPEEV QRQLVSLNLI KRSHIALPRA RSSRQGYRSG SVGNERTGFS
301: QGRQTLRRAI STSLSFSFQP APVRSTLDRD NLMRETSQAN DKDFGERSFQ RLMPEKN
Arabidopsis Description
ATL37Putative RING-H2 finger protein ATL37 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.