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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005936_P001 Maize plasma membrane 82.66 83.72
EER99041 Sorghum endoplasmic reticulum, plasma membrane 83.92 81.07
Os09t0468300-00 Rice golgi, plasma membrane 68.84 70.8
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 69.6 70.66
HORVU5Hr1G069980.1 Barley plasma membrane 68.09 70.57
TraesCS5A01G248100.1 Wheat plasma membrane 69.1 69.27
TraesCS5B01G245800.1 Wheat plasma membrane 68.84 69.19
TraesCS3B01G549900.1 Wheat vacuole 49.25 62.22
TraesCS3D01G495500.1 Wheat vacuole 55.28 56.99
Zm00001d031261_P001 Maize golgi 46.48 49.07
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 37.94 44.94
KRH33975 Soybean golgi, plasma membrane, vacuole 38.69 42.9
Bra010641.1-P Field mustard extracellular, golgi 30.65 39.61
CDX90377 Canola extracellular, golgi 30.65 39.61
KRH68588 Soybean plasma membrane 36.18 39.34
KRG96857 Soybean vacuole 36.93 39.2
CDY39477 Canola extracellular 30.15 38.71
CDY53236 Canola plasma membrane 33.17 38.04
AT4G09100.1 Thale cress extracellular 12.56 37.88
Bra036631.1-P Field mustard plasma membrane 33.17 37.71
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 33.17 37.71
CDX99986 Canola plasma membrane 32.91 37.54
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 34.67 37.5
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 39.45 37.29
Zm00001d003499_P001 Maize endoplasmic reticulum, golgi, plasma membrane 36.18 37.11
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 38.44 36.87
Bra040642.1-P Field mustard plasma membrane 35.18 36.27
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 29.4 36.22
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 38.19 36.19
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.64 36.18
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 27.64 36.18
Zm00001d018122_P001 Maize vacuole 37.94 36.04
CDY18787 Canola plasma membrane 34.92 35.92
AT3G05200.1 Thale cress plasma membrane 35.68 35.68
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 29.4 35.03
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 29.9 35.0
CDX80653 Canola plasma membrane 26.63 34.98
KRH72413 Soybean cytosol, golgi, vacuole 32.66 34.76
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 34.67 34.67
CDX86163 Canola plasma membrane 26.13 34.67
Bra009962.1-P Field mustard mitochondrion, plastid 24.87 34.62
CDY25038 Canola plasma membrane 32.16 34.59
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 34.42 34.42
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.17 34.2
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 33.92 33.92
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 32.16 33.77
CDX82175 Canola extracellular 19.85 33.76
CDY05577 Canola plasma membrane 32.16 33.51
Bra020591.1-P Field mustard plasma membrane 31.91 33.33
CDX75097 Canola extracellular 11.56 33.33
AT2G34990.2 Thale cress plasma membrane 26.38 32.41
CDX84270 Canola cytosol, plastid, vacuole 25.13 31.95
Bra038386.1-P Field mustard extracellular 11.06 31.88
CDY48058 Canola extracellular 11.06 31.88
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 29.65 31.22
PGSC0003DMT400073575 Potato extracellular, plasma membrane 33.92 31.18
Bra005375.1-P Field mustard cytosol, nucleus, plastid 24.37 30.99
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 24.37 30.99
KRH72412 Soybean nucleus, plasma membrane, plastid 29.9 30.83
AT4G09120.1 Thale cress plasma membrane 26.38 30.43
CDY31657 Canola extracellular, plasma membrane, plastid 27.89 30.16
KRH16794 Soybean plasma membrane 29.65 30.1
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 27.14 30.08
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 29.4 29.92
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 27.64 29.89
AT1G35330.1 Thale cress endoplasmic reticulum 24.62 29.88
Zm00001d016901_P001 Maize vacuole 25.88 29.68
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 27.39 29.62
CDX82179 Canola plasma membrane 25.88 29.34
Bra040855.1-P Field mustard golgi, plasma membrane 27.64 29.26
CDY21367 Canola golgi, plasma membrane 27.64 29.26
Zm00001d026494_P001 Maize plastid 14.82 29.06
CDY70284 Canola plasma membrane 28.39 29.05
Zm00001d027983_P001 Maize plasma membrane, plastid 26.38 29.01
CDY62007 Canola golgi, plasma membrane 27.39 28.99
AT1G72200.1 Thale cress plasma membrane 29.4 28.96
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 24.62 28.91
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 28.39 28.75
CDX90713 Canola extracellular, golgi, plasma membrane 24.37 28.61
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 21.61 28.48
CDY05049 Canola plasma membrane 20.85 28.42
Zm00001d048230_P001 Maize golgi 27.14 28.42
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 25.38 28.29
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 24.62 28.16
Bra008016.1-P Field mustard plasma membrane 28.39 28.04
CDY03651 Canola plasma membrane 28.39 28.04
Bra012330.1-P Field mustard golgi, plasma membrane 23.87 27.62
AT1G22500.1 Thale cress plasma membrane 26.38 27.56
CDY12022 Canola plasma membrane 24.37 27.48
CDX82176 Canola extracellular 25.13 27.4
Bra028075.1-P Field mustard plasma membrane 24.12 27.2
Zm00001d029395_P001 Maize plasma membrane, plastid 25.88 26.89
CDY03116 Canola plasma membrane 23.62 26.63
CDY70750 Canola extracellular, mitochondrion, nucleus 19.85 26.07
Bra008015.1-P Field mustard plasma membrane 25.88 26.01
CDY03652 Canola plasma membrane 25.88 26.01
Solyc12g087860.1.1 Tomato vacuole 24.12 25.74
CDY05145 Canola plasma membrane 19.1 25.59
CDY27787 Canola extracellular, plasma membrane, vacuole 19.35 25.58
Zm00001d030038_P001 Maize plastid 14.82 25.43
PGSC0003DMT400045807 Potato plasma membrane 24.12 25.4
CDY12527 Canola extracellular, plasma membrane, vacuole 12.56 21.01
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 12.31 20.59
Zm00001d039216_P001 Maize endoplasmic reticulum, extracellular, golgi 19.35 19.69
Zm00001d014612_P001 Maize peroxisome 18.84 18.89
Zm00001d009777_P001 Maize extracellular, golgi, plasma membrane 18.59 18.18
CDY50446 Canola mitochondrion 9.8 16.32
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10UniProt:A0A1D6I689GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016874InterPro:IPR001841InterPro:IPR013083ProteinID:ONM55606.1
PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF322SMART:SM00184SUPFAM:SSF57850
SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000845804EEnsemblPlantsGene:Zm00001d020789EnsemblPlants:Zm00001d020789_P001EnsemblPlants:Zm00001d020789_T001
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:::
Description
E3 ubiquitin-protein ligase ATL6
Coordinates
chr7:-:132733577..132734773
Molecular Weight (calculated)
42094.6 Da
IEP (calculated)
8.980
GRAVY (calculated)
-0.300
Length
398 amino acids
Sequence
(BLAST)
001: MVRGNGRLLP LSLLLLAAAD FTTVHGQGQQ PEGPYYSRSF NPSMAIVIVV LIAAFFFLGF FSVYVRHCYG DGSSGYSASP APGGAAARSR RQQRGLDSAV
101: LESFPTMAYA DVKAHKAGKG ALECAVCLSE FDDDETLRLL PKCSHVFHPD CIDTWLASHV TCPVCRTNLA LGPDANAPPP DDDTPELLPA PEAQELPSPT
201: SAPPPSAAVV IDVEETEEER IIRAEADELM RIGSVKRALR SKSGRAPARF PRSHSTGHSL AASACATTGT ERFTLRLPDH VLRDLTAAGK LQRTTSLVAF
301: RSSRGGSTRR GVSVRTGGGG GEGTSRAGRS IRLGQSGRWP SFLARTLSAR LPAWGSRSTR RSVQTDGSSK GGRTVGDAGA GAKSSEHDDQ ACAPGQRV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.