Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90377 Canola extracellular, golgi 99.35 99.35
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 70.13 66.87
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 15.26 33.1
HORVU5Hr1G069980.1 Barley plasma membrane 39.61 31.77
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 40.26 31.63
TraesCS5B01G245800.1 Wheat plasma membrane 40.26 31.31
Zm00001d005936_P001 Maize plasma membrane 39.94 31.3
Os09t0468300-00 Rice golgi, plasma membrane 39.29 31.27
TraesCS5A01G248100.1 Wheat plasma membrane 39.94 30.98
Bra009962.1-P Field mustard mitochondrion, plastid 28.57 30.77
Zm00001d020789_P001 Maize plasma membrane 39.61 30.65
EER99041 Sorghum endoplasmic reticulum, plasma membrane 40.58 30.34
Bra040642.1-P Field mustard plasma membrane 37.66 30.05
Bra036631.1-P Field mustard plasma membrane 34.09 30.0
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 29.55 29.93
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 29.55 29.84
TraesCS3D01G495500.1 Wheat vacuole 37.34 29.79
Bra038386.1-P Field mustard extracellular 13.31 29.71
GSMUA_Achr3P20400_001 Banana mitochondrion 33.12 29.65
GSMUA_AchrUn_... Banana golgi, plasma membrane 33.77 29.46
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 36.69 29.27
TraesCS3B01G549900.1 Wheat vacuole 29.87 29.21
GSMUA_Achr6P30500_001 Banana plasma membrane 27.27 28.77
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 31.82 28.41
Bra020591.1-P Field mustard plasma membrane 34.74 28.08
GSMUA_AchrUn_... Banana plastid 32.79 28.06
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 19.16 27.83
Bra005375.1-P Field mustard cytosol, nucleus, plastid 28.25 27.8
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 34.74 27.58
HORVU4Hr1G080840.1 Barley cytosol 21.1 27.43
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 31.82 27.37
TraesCS6D01G113000.1 Wheat golgi 35.39 27.18
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 35.39 26.98
EES18560 Sorghum golgi, plasma membrane 34.42 26.97
Os08t0484200-01 Rice golgi 36.04 26.88
Bra013268.1-P Field mustard plasma membrane 25.65 26.87
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 35.39 26.85
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 31.17 26.74
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 35.06 26.73
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 24.35 26.69
Zm00001d031261_P001 Maize golgi 32.14 26.26
Bra025008.1-P Field mustard plastid 24.35 26.13
Bra040855.1-P Field mustard golgi, plasma membrane 31.82 26.06
HORVU4Hr1G078260.1 Barley plasma membrane 29.87 25.77
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 30.52 25.54
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 34.74 25.42
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 34.09 25.3
Bra012330.1-P Field mustard golgi, plasma membrane 28.25 25.29
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 27.6 25.07
Bra028075.1-P Field mustard plasma membrane 28.57 24.93
TraesCS4D01G302600.1 Wheat plasma membrane 28.57 24.79
TraesCS4A01G404600.1 Wheat plasma membrane 28.57 24.79
TraesCS4B01G304400.1 Wheat plasma membrane 28.57 24.79
EER92732 Sorghum golgi 29.55 24.73
Os03t0188200-01 Rice golgi 28.25 24.65
Zm00001d018122_P001 Maize vacuole 33.44 24.58
Bra008016.1-P Field mustard plasma membrane 31.82 24.32
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.49 24.13
OQU85775 Sorghum golgi, plasma membrane, vacuole 33.12 24.11
TraesCS4A01G104900.1 Wheat mitochondrion 30.19 24.03
Bra008015.1-P Field mustard plasma membrane 30.84 23.99
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 34.42 23.98
GSMUA_Achr10P... Banana plasma membrane 30.19 23.97
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.49 23.95
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.49 23.95
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 26.62 23.56
Zm00001d027983_P001 Maize plasma membrane, plastid 27.27 23.2
Zm00001d048230_P001 Maize golgi 28.57 23.16
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 32.79 23.11
TraesCS7D01G178000.1 Wheat golgi 30.52 23.04
TraesCS7B01G081700.1 Wheat golgi 30.84 22.95
HORVU6Hr1G077610.1 Barley plasma membrane 30.19 22.91
TraesCS4D01G200100.1 Wheat plastid 30.52 22.71
TraesCS7A01G176700.1 Wheat golgi 30.52 22.65
HORVU4Hr1G057610.1 Barley plastid 30.19 22.57
Zm00001d029395_P001 Maize plasma membrane, plastid 27.92 22.45
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 26.95 21.45
TraesCS4B01G199100.1 Wheat plastid 29.87 20.58
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 35.06 19.82
Os03t0391100-00 Rice endoplasmic reticulum, golgi 27.92 19.77
Bra005343.1-P Field mustard plastid 17.21 19.0
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 25.65 18.99
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 23.05 17.03
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 22.4 16.43
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 22.08 16.19
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 21.1 16.09
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 17.53 16.07
Bra012630.1-P Field mustard nucleus 23.7 11.79
Protein Annotations
EnsemblPlants:Bra010641.1EnsemblPlants:Bra010641.1-PEnsemblPlantsGene:Bra010641Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SignalP:SignalP-TMSMART:SM00184SUPFAM:SSF57850
TMHMM:TMhelixUniParc:UPI00025465A9UniProt:M4D2E1MapMan:19.2.2.1.5.3.3::
Description
AT4G40070 (E=2e-099) | protein binding / zinc ion binding
Coordinates
chrA08:-:15735817..15736743
Molecular Weight (calculated)
34197.5 Da
IEP (calculated)
8.414
GRAVY (calculated)
-0.328
Length
308 amino acids
Sequence
(BLAST)
001: MARVQGFISH RWIIFQLITV LHVANAQSLP PPSQDELQPG HAPSKTTVFG VLIAAFFFFG LLSVYIRHCT RAMPGHSYTN SRRRAFEGCS RRGGLEDAVV
101: ESFPVFAYSS VKESKIGAGD LECAICLNEL EDRETVRLLP VCNHLFHVDC IDAWLYSHAT CPVCRFNLTA KPVKTGSEAP VSDHVVIDIR GDSEADEEEE
201: KSHHRRPSSE IVGKFPRSNS TGHSMGRLSD GTERFTLRLP EDVRRRIMAA KGRRLKRTRS FDADLMDSGY VVGSGGKSDR VSWADRWGLF VSKSNSGSVR
301: SPNGDSLT
Best Arabidopsis Sequence Match ( AT4G40070.1 )
(BLAST)
001: MMTRVECFNP HRWIILHVAI IIQSKANAQS FSPSPPDLQT GHTPSKTTVF AVLVTLFFLT GLLSVYIRHC ARSNPDSSTR YFRNRANDGS SRRGGLDNAV
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK
Arabidopsis Description
ATL32RING-H2 finger protein ATL32 [Source:UniProtKB/Swiss-Prot;Acc:Q8W571]
SUBAcon: [mitochondrion,golgi,plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.