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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70750 Canola extracellular, mitochondrion, nucleus 76.44 87.79
AT3G05200.1 Thale cress plasma membrane 79.89 69.85
Bra040642.1-P Field mustard plasma membrane 74.71 67.36
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 74.43 67.1
Bra036631.1-P Field mustard plasma membrane 51.72 51.43
Bra020591.1-P Field mustard plasma membrane 54.31 49.61
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.91 38.82
Bra009962.1-P Field mustard mitochondrion, plastid 31.32 38.11
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 32.76 33.93
KRH33975 Soybean golgi, plasma membrane, vacuole 33.91 32.87
KRG96857 Soybean vacuole 33.91 31.47
KRH68588 Soybean plasma membrane 31.9 30.33
GSMUA_AchrUn_... Banana golgi, plasma membrane 27.59 27.2
Os09t0468300-00 Rice golgi, plasma membrane 29.89 26.87
Zm00001d005936_P001 Maize plasma membrane 30.17 26.72
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 26.44 26.67
Bra010641.1-P Field mustard extracellular, golgi 23.56 26.62
HORVU5Hr1G069980.1 Barley plasma membrane 29.31 26.56
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 29.89 26.53
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 30.17 26.38
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 29.89 26.13
TraesCS5A01G248100.1 Wheat plasma membrane 29.6 25.94
TraesCS5B01G245800.1 Wheat plasma membrane 29.31 25.76
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 31.03 25.71
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 26.44 25.7
TraesCS3B01G549900.1 Wheat vacuole 22.7 25.08
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 21.84 24.92
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 27.59 24.74
Zm00001d020789_P001 Maize plasma membrane 28.16 24.62
GSMUA_Achr10P... Banana plasma membrane 27.3 24.48
GSMUA_Achr3P20400_001 Banana mitochondrion 24.14 24.42
EER99041 Sorghum endoplasmic reticulum, plasma membrane 28.74 24.27
PGSC0003DMT400073575 Potato extracellular, plasma membrane 30.17 24.25
GSMUA_Achr6P30500_001 Banana plasma membrane 20.11 23.97
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 27.01 23.27
TraesCS6D01G113000.1 Wheat golgi 26.72 23.19
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 27.01 23.15
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 23.85 22.55
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 25.57 22.03
EES18560 Sorghum golgi, plasma membrane 24.71 21.88
Os08t0484200-01 Rice golgi 25.86 21.79
TraesCS3D01G495500.1 Wheat vacuole 24.14 21.76
Zm00001d031261_P001 Maize golgi 23.56 21.75
GSMUA_AchrUn_... Banana plastid 22.41 21.67
Bra005375.1-P Field mustard cytosol, nucleus, plastid 18.97 21.09
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 25.0 20.67
HORVU4Hr1G078260.1 Barley plasma membrane 20.69 20.17
TraesCS4D01G302600.1 Wheat plasma membrane 20.11 19.72
TraesCS7D01G178000.1 Wheat golgi 22.99 19.61
TraesCS7B01G081700.1 Wheat golgi 23.28 19.57
TraesCS7A01G176700.1 Wheat golgi 23.28 19.52
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 18.97 19.47
HORVU4Hr1G080840.1 Barley cytosol 13.22 19.41
Bra008016.1-P Field mustard plasma membrane 22.41 19.35
TraesCS4A01G404600.1 Wheat plasma membrane 19.54 19.15
TraesCS4B01G304400.1 Wheat plasma membrane 19.54 19.15
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 24.14 19.0
Bra028075.1-P Field mustard plasma membrane 19.25 18.98
Os03t0188200-01 Rice golgi 19.25 18.98
Zm00001d018122_P001 Maize vacuole 22.7 18.85
Bra025008.1-P Field mustard plastid 15.52 18.82
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 22.41 18.8
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 19.25 18.66
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 21.26 18.41
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 22.99 18.31
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 21.26 18.27
Bra008015.1-P Field mustard plasma membrane 20.69 18.18
Bra038386.1-P Field mustard extracellular 7.18 18.12
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 20.98 18.02
OQU85775 Sorghum golgi, plasma membrane, vacuole 21.84 17.97
EER92732 Sorghum golgi 18.97 17.93
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 10.92 17.92
TraesCS4A01G104900.1 Wheat mitochondrion 19.83 17.83
Zm00001d029395_P001 Maize plasma membrane, plastid 19.54 17.75
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 7.18 17.61
HORVU6Hr1G077610.1 Barley plasma membrane 20.4 17.49
HORVU4Hr1G057610.1 Barley plastid 20.69 17.48
Bra012330.1-P Field mustard golgi, plasma membrane 17.24 17.44
TraesCS4D01G200100.1 Wheat plastid 20.69 17.39
Bra013268.1-P Field mustard plasma membrane 14.66 17.35
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 19.25 17.31
Bra040855.1-P Field mustard golgi, plasma membrane 18.68 17.29
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 13.79 17.08
Zm00001d027983_P001 Maize plasma membrane, plastid 17.53 16.85
Zm00001d048230_P001 Maize golgi 18.1 16.58
Os03t0391100-00 Rice endoplasmic reticulum, golgi 20.11 16.09
TraesCS4B01G199100.1 Wheat plastid 20.4 15.88
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 24.71 15.78
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 18.68 15.62
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 13.79 11.51
Bra005343.1-P Field mustard plastid 9.2 11.47
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 13.79 11.43
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 13.51 11.19
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 12.07 10.4
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 9.2 9.52
Bra012630.1-P Field mustard nucleus 13.51 7.59
Protein Annotations
EnsemblPlants:Bra001139.1EnsemblPlants:Bra001139.1-PEnsemblPlantsGene:Bra001139GO:GO:0005575GO:GO:0016020GO:GO:0016021
SEG:segSignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI00025409CEUniProt:M4CAB0MapMan:35.1
Description
AT3G05200 (E=7e-090) ATL6 | ATL6; protein binding / zinc ion binding
Coordinates
chrA03:+:14931616..14932747
Molecular Weight (calculated)
37835.7 Da
IEP (calculated)
10.297
GRAVY (calculated)
-0.367
Length
348 amino acids
Sequence
(BLAST)
001: MKRSDHATGV FKIVFLLILL AAELVAGQDN PDPRDERYNY GNLSPAMAVI VVILIAALFF MGFFSIYFRH CSGAPDAGVS PAGGGRTRGN VTAAARGLDV
101: SYVCLLGGED AEARERGAGV CDLSERVRRR RNAAANLAEQ VAVEPDLELQ EVGVDPEPVV DASVPEQSVT NEVDSRRLPG VPVDVKRVKF SRSHTTGHSV
201: VQPGECTERF TLRLPEDVRK RMVENWKLNR SDSLTRGGSS RRGKPIDRSR AWSDRWLFRK TPSFLWRSRD DGSIRLGATG SVRGNAVVNS TGDSVRSDRW
301: AFLRNGSFLW RNSSVHVPRG GVNKDGEGTS VKSTGAGGST SGSVRIPV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.