CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	100.0	100.0
CDX80653	Canola	plasma membrane	78.29	78.55
CDX86163	Canola	plasma membrane	73.36	74.33
CDX99986	Canola	plasma membrane	65.13	56.73
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	64.8	56.29
CDY25038	Canola	plasma membrane	66.12	54.32
CDY05577	Canola	plasma membrane	65.79	52.36
CDY53236	Canola	plasma membrane	51.64	45.24
CDY18787	Canola	plasma membrane	53.62	42.12
CDX82175	Canola	extracellular	26.32	34.19
CDY05145	Canola	plasma membrane	31.25	31.99
CDY27787	Canola	extracellular, plasma membrane, vacuole	31.58	31.89
CDX75097	Canola	extracellular	14.47	31.88
CDY48058	Canola	extracellular	14.47	31.88
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	34.87	31.55
GSMUA_Achr6P30500_001	Banana	plasma membrane	30.26	31.51
CDY70750	Canola	extracellular, mitochondrion, nucleus	31.25	31.35
GSMUA_Achr7P12810_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	31.25	31.15
GSMUA_Achr5P17910_001	Banana	golgi, plasma membrane, vacuole	34.87	30.72
KRH33975	Soybean	golgi, plasma membrane, vacuole	36.18	30.64
CDY31686	Canola	nucleus	10.53	30.48
CDY05049	Canola	plasma membrane	28.62	29.79
CDX90377	Canola	extracellular, golgi	29.93	29.55
KRG96857	Soybean	vacuole	35.86	29.07
Zm00001d005936_P001	Maize	plasma membrane	37.5	29.01
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	20.07	28.77
CDY39477	Canola	extracellular	29.28	28.71
GSMUA_Achr9P15010_001	Banana	endoplasmic reticulum, plasma membrane	33.55	28.49
CDY04519	Canola	endoplasmic reticulum, extracellular, plasma membrane	13.16	28.17
KRH68588	Soybean	plasma membrane	33.88	28.14
TraesCS5D01G254900.1	Wheat	golgi, plasma membrane	35.86	27.81
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	32.24	27.76
CDX90713	Canola	extracellular, golgi, plasma membrane	30.92	27.73
Zm00001d020789_P001	Maize	plasma membrane	36.18	27.64
EER99041	Sorghum	endoplasmic reticulum, plasma membrane	37.17	27.43
Os09t0468300-00	Rice	golgi, plasma membrane	34.87	27.39
TraesCS5B01G245800.1	Wheat	plasma membrane	35.53	27.27
TraesCS5A01G248100.1	Wheat	plasma membrane	35.53	27.2
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	37.5	27.14
CDX82179	Canola	plasma membrane	31.25	27.07
GSMUA_Achr10P...	Banana	plasma membrane	34.54	27.06
HORVU5Hr1G069980.1	Barley	plasma membrane	33.88	26.82
GSMUA_Achr3P20400_001	Banana	mitochondrion	30.26	26.74
CDX78812	Canola	plasma membrane	25.66	26.53
CDY44502	Canola	plasma membrane	25.66	26.53
CDY03202	Canola	plasma membrane	24.34	26.33
CDX84270	Canola	cytosol, plastid, vacuole	26.97	26.2
CDX77681	Canola	golgi, mitochondrion, plasma membrane, plastid	24.67	26.13
CDY63052	Canola	golgi, mitochondrion, plasma membrane, plastid	24.67	26.13
GSMUA_Achr3P06680_001	Banana	mitochondrion, plastid	33.22	26.03
CDY35174	Canola	plasma membrane	24.01	25.98
CDY70284	Canola	plasma membrane	33.22	25.96
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	26.32	25.56
CDY03651	Canola	plasma membrane	33.88	25.56
CDX82176	Canola	extracellular	30.59	25.48
TraesCS3D01G495500.1	Wheat	vacuole	32.24	25.39
GSMUA_AchrUn_...	Banana	plastid	29.93	25.28
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	30.59	25.27
CDY31657	Canola	extracellular, plasma membrane, plastid	30.59	25.27
CDY62007	Canola	golgi, plasma membrane	31.25	25.27
CDY21367	Canola	golgi, plasma membrane	30.92	25.0
CDY03116	Canola	plasma membrane	28.95	24.93
CDY01502	Canola	plasma membrane	24.34	24.92
CDY12022	Canola	plasma membrane	28.62	24.65
HORVU4Hr1G080840.1	Barley	cytosol	18.75	24.05
Os08t0484200-01	Rice	golgi	32.57	23.97
CDY05713	Canola	extracellular	11.51	23.81
TraesCS3B01G549900.1	Wheat	vacuole	24.67	23.81
CDY03652	Canola	plasma membrane	30.92	23.74
TraesCS4A01G404600.1	Wheat	plasma membrane	27.63	23.66
TraesCS4B01G304400.1	Wheat	plasma membrane	27.63	23.66
HORVU4Hr1G078260.1	Barley	plasma membrane	27.63	23.53
TraesCS4D01G302600.1	Wheat	plasma membrane	27.3	23.38
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	30.92	23.27
Os03t0188200-01	Rice	golgi	26.97	23.23
TraesCS6D01G113000.1	Wheat	golgi	30.26	22.94
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	30.59	22.91
EES18560	Sorghum	golgi, plasma membrane	29.61	22.9
TraesCS6B01G151000.1	Wheat	extracellular, golgi, plasma membrane	30.26	22.77
TraesCS4A01G104900.1	Wheat	mitochondrion	28.29	22.22
Zm00001d037192_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	30.26	21.85
TraesCS4D01G200100.1	Wheat	plastid	29.61	21.74
TraesCS6D01G294800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.95	21.73
HORVU4Hr1G057610.1	Barley	plastid	29.28	21.6
Zm00001d031261_P001	Maize	golgi	26.64	21.49
Zm00001d018122_P001	Maize	vacuole	29.61	21.48
Zm00001d052189_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	29.28	21.45
TraesCS7B01G081700.1	Wheat	golgi	28.95	21.26
EER92732	Sorghum	golgi	25.66	21.2
TraesCS6B01G346000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	27.96	21.14
TraesCS7D01G178000.1	Wheat	golgi	28.29	21.08
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	30.59	21.04
TraesCS7A01G176700.1	Wheat	golgi	28.62	20.96
TraesCS6A01G315600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	27.63	20.74
Zm00001d048230_P001	Maize	golgi	25.66	20.53
HORVU6Hr1G077610.1	Barley	plasma membrane	27.3	20.44
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	29.28	20.37
OQU85775	Sorghum	golgi, plasma membrane, vacuole	28.29	20.33
Zm00001d027983_P001	Maize	plasma membrane, plastid	24.01	20.17
CDY62419	Canola	cytosol	9.87	20.0
KXG39223	Sorghum	golgi, plasma membrane, plastid, vacuole	24.67	19.38
Zm00001d029395_P001	Maize	plasma membrane, plastid	24.34	19.32
TraesCS4B01G199100.1	Wheat	plastid	28.29	19.24
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	26.32	18.39
CDY12527	Canola	extracellular, plasma membrane, vacuole	14.14	18.07
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	24.34	17.79
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	13.82	17.65
OQU76061	Sorghum	cytosol, peroxisome, plasma membrane	30.59	17.06
CDX98867	Canola	endoplasmic reticulum, golgi	19.41	16.71
CDY35921	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.07	16.44
CDY13888	Canola	plasma membrane	19.74	16.22
CDX97460	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.71	16.18
CDY66475	Canola	endoplasmic reticulum, plasma membrane	21.71	16.14
CDX70126	Canola	plasma membrane	21.38	16.13
CDX81954	Canola	endoplasmic reticulum, plasma membrane, vacuole	20.07	15.93
CDY50930	Canola	endoplasmic reticulum, plasma membrane	21.71	15.71
CDX92900	Canola	endoplasmic reticulum, plasma membrane	21.38	15.66
CDY06859	Canola	endoplasmic reticulum, plasma membrane	21.38	15.59
CDY35230	Canola	endoplasmic reticulum, plasma membrane	21.38	15.59
CDX90435	Canola	nucleus	24.34	12.05
CDY50446	Canola	mitochondrion	9.21	11.72
CDY05714	Canola	cytosol	5.59	7.98
CDY31685	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX86162	EnsemblPlantsGene:GSBRNA2T00144222001	Gene3D:3.30.40.10	GO:A0A078DAV4	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF263	PFAM:PF13639	PFscan:PS50089
ProteinID:CDX86162	ProteinID:CDX86162.1	SEG:seg	SignalP:SignalP-TM	SMART:SM00184	SUPFAM:SSF57850
TMHMM:TMhelix	UniParc:UPI000253F4B3	MapMan:19.2.2.1.5.3.3	:	:	:

Description

BnaA06g28790D

Coordinates

chrLK031845:-:91700..92614

Molecular Weight (calculated)

34187.0 Da

IEP (calculated)

6.840

GRAVY (calculated)

-0.265

Length

304 amino acids

Sequence
(BLAST)

001: MKSFLPLTIK QTALPALVLF LLLAMSELAS SQPGLEDPNK PYDYSRTLTM YLVIMIIAMP FVYFSLYIRH CREAADGSVN HLVGERRMTN ATAAHGLDAS
101: VIETFPTFIY SEVKTQKIGN GALECAICLN EFQDDETLRL LPKCDHVFHP HCIGAWLQGH VTCPVCRTNL ADQRQTTEPV EPEVITETDV ESQQTVIHEP
201: AVEQGESVGR VKFSRSHTTG HSVVLSGECT DRFTLRLPDD LRNKLLASGK MTRSKSLLNL PRSTGKPVDR SLDRWDQWLF IKTPPFRWQS QDDGSIRRGR
301: GDSI

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.