CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011991.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	97.18	97.18
AT2G27940.1	Thale cress	plasma membrane	72.54	43.46
PGSC0003DMT400001221	Potato	vacuole	40.14	30.48
CDX75097	Canola	extracellular	25.35	26.09
CDY48058	Canola	extracellular	23.94	24.64
Solyc11g066510.1.1	Tomato	nucleus	39.44	23.73
CDY31686	Canola	nucleus	16.2	21.9
CDY05713	Canola	extracellular	19.72	19.05
CDX82175	Canola	extracellular	30.28	18.38
CDY62419	Canola	cytosol	15.49	14.67
CDX90377	Canola	extracellular, golgi	31.69	14.61
CDY39477	Canola	extracellular	31.69	14.52
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.17	13.16
CDX80653	Canola	plasma membrane	27.46	12.87
CDX86163	Canola	plasma membrane	26.06	12.33
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	30.28	12.29
CDX82179	Canola	plasma membrane	30.28	12.25
CDX99986	Canola	plasma membrane	29.58	12.03
CDY25038	Canola	plasma membrane	30.99	11.89
CDY53236	Canola	plasma membrane	28.87	11.82
CDY05049	Canola	plasma membrane	23.94	11.64
CDY05577	Canola	plasma membrane	30.99	11.52
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	25.35	11.5
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	29.58	11.41
CDY31657	Canola	extracellular, plasma membrane, plastid	29.58	11.41
CDY70284	Canola	plasma membrane	30.99	11.31
CDX98867	Canola	endoplasmic reticulum, golgi	27.46	11.05
CDX84270	Canola	cytosol, plastid, vacuole	23.94	10.86
CDY03652	Canola	plasma membrane	30.28	10.86
CDY35174	Canola	plasma membrane	21.13	10.68
CDY03651	Canola	plasma membrane	30.28	10.67
CDY18787	Canola	plasma membrane	28.87	10.59
CDY13888	Canola	plasma membrane	27.46	10.54
CDY35921	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.46	10.51
CDY63052	Canola	golgi, mitochondrion, plasma membrane, plastid	21.13	10.45
CDX77681	Canola	golgi, mitochondrion, plasma membrane, plastid	21.13	10.45
CDX82176	Canola	extracellular	26.76	10.41
CDY03202	Canola	plasma membrane	20.42	10.32
CDX78812	Canola	plasma membrane	21.13	10.2
CDY44502	Canola	plasma membrane	21.13	10.2
CDX81954	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.46	10.18
CDY21367	Canola	golgi, plasma membrane	26.76	10.11
CDY62007	Canola	golgi, plasma membrane	26.76	10.11
CDY01502	Canola	plasma membrane	21.13	10.1
CDX90713	Canola	extracellular, golgi, plasma membrane	23.24	9.73
CDY03116	Canola	plasma membrane	23.94	9.63
CDX70126	Canola	plasma membrane	26.76	9.43
CDY12022	Canola	plasma membrane	23.24	9.35
CDX92900	Canola	endoplasmic reticulum, plasma membrane	26.76	9.16
CDX97460	Canola	endoplasmic reticulum, extracellular, plasma membrane	26.06	9.07
CDY66475	Canola	endoplasmic reticulum, plasma membrane	26.06	9.05
CDY06859	Canola	endoplasmic reticulum, plasma membrane	26.06	8.87
CDY50930	Canola	endoplasmic reticulum, plasma membrane	26.06	8.81
CDY35230	Canola	endoplasmic reticulum, plasma membrane	25.35	8.63
CDX90435	Canola	nucleus	21.13	4.89
CDY05145	Canola	plasma membrane	9.86	4.71
CDY27787	Canola	extracellular, plasma membrane, vacuole	9.86	4.65
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	7.75	4.62
CDY70750	Canola	extracellular, mitochondrion, nucleus	9.86	4.62
CDY12527	Canola	extracellular, plasma membrane, vacuole	7.04	4.2
CDY50446	Canola	mitochondrion	2.11	1.26
CDY31685	Canola	cytosol	0.0	0.0
CDY05714	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY04519	EnsemblPlantsGene:GSBRNA2T00118689001	Gene3D:3.30.40.10	GO:A0A078EVB7	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF274	PFAM:PF13639	PFscan:PS50089
ProteinID:CDY04519	ProteinID:CDY04519.1	SEG:seg	SMART:SM00184	SUPFAM:SSF57850	TMHMM:TMhelix
UniParc:UPI0004EE6A6E	MapMan:19.2.2.1.5.3.3	:	:	:	:

Description

BnaA07g13450D

Coordinates

chrLK031955:+:441594..442022

Molecular Weight (calculated)

16261.4 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.037

Length

142 amino acids

Sequence
(BLAST)

001: MALTIFVFLV ALFFMAFFSV FIRHFAEDES TADISFSRPT TRRSYSPPRR HFNLPRGLDS EAVRSLPVYR YTKSAKHWIE DCIICLSNFE EGETVKVIPH
101: CGHLFHVDCV DKWLNSHVTC PLCRSSQVLP DQGSAESSCK EV

Best Arabidopsis Sequence Match ( AT2G27940.1 )
(BLAST)

001: METKHLRKLL QLYQACGGEQ ELTKTVQNVT SSPLTPTPPP QPPSALDSTM ALTIFILLVA LFFMGFFSVY FRHFADSSSS TVDISSMPRT RSSRMSPRRL
101: STSVVVSRPY SFRRGLDSQA VRSLPVYRYT KAAKQRNEDC VICLSDFEEG ETVKVIPHCG HVFHVDCVDT WLSSYVTCPL CRSNQLFSDK DLGMQEPPDQ
201: DSAEEHDTCD GVDTCVRRCS SCSSLGQRTG LERSLSL

Arabidopsis Description

ATL57RING-H2 finger protein ATL57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.