Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 77.35 | 80.69 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 29.28 | 31.55 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 30.94 | 31.2 |
| KRH68588 | Soybean | plasma membrane | 29.28 | 28.96 |
| KRG96857 | Soybean | vacuole | 29.56 | 28.53 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 26.24 | 28.44 |
| KRH38505 | Soybean | plasma membrane, vacuole | 22.38 | 28.42 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 26.24 | 27.94 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 28.45 | 27.54 |
| KRH53320 | Soybean | mitochondrion | 7.73 | 26.42 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 26.8 | 25.59 |
| KRH31340 | Soybean | endoplasmic reticulum, plasma membrane | 15.75 | 25.33 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 19.34 | 24.31 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 20.44 | 24.03 |
| KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 11.6 | 23.86 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 24.86 | 23.32 |
| KRH16794 | Soybean | plasma membrane | 25.14 | 23.21 |
| KRH13267 | Soybean | plasma membrane | 10.22 | 22.7 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 19.34 | 22.65 |
| KRH70712 | Soybean | endoplasmic reticulum, extracellular, vacuole | 11.05 | 18.78 |
| KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 7.73 | 17.72 |
| KRH62061 | Soybean | plastid | 12.15 | 16.24 |
| KRH16295 | Soybean | plasma membrane | 17.13 | 15.7 |
| KRH62179 | Soybean | plasma membrane | 14.36 | 15.48 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 17.4 | 15.04 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 16.57 | 14.63 |
| KRH76331 | Soybean | endoplasmic reticulum | 16.85 | 14.32 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | UniProt:A0A0R0IF00 | EMBL:ACUP02005829 | EnsemblPlantsGene:GLYMA_09G140700 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH38504 | ProteinID:KRH38504 |
| ProteinID:KRH38504.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF208 | SMART:SM00184 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0002338770 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:34931380..34933537
Molecular Weight (calculated)
40199.5 Da
IEP (calculated)
6.397
GRAVY (calculated)
-0.304
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MLELSESHSK NLHFPLTHII LFFTCFKLSK AQSSMEPVPT YITHHSWEPS VAITVGAIII ALLLMGIISI YLRRCAESHI IITTTQTTTT LPCSCAQGIN
101: RELLNTFPTL FYSNIKDLKK GNETLECAVC LTDFTDKDAL RLLPKCNHVF HPHCIDSWLA CHVTCPVCRA NLSQESSHVS ITVPPHNEEE GSRNTTTNEA
201: TQIEQSTSND VGQVCLGDPT PTSDAAKIMY ISEEQQQQHS SSEPTFEVEL DPNTNSTTTT INNNGGDGVV VVSERNLSRS NSTGHCIVEE QGKGVERYTL
301: RLPEDVRRYI LVNHGRSVQR SASVKGVCWS DSEESYKGKR VNGEVRVEKR WVICTPPFVG HG
101: RELLNTFPTL FYSNIKDLKK GNETLECAVC LTDFTDKDAL RLLPKCNHVF HPHCIDSWLA CHVTCPVCRA NLSQESSHVS ITVPPHNEEE GSRNTTTNEA
201: TQIEQSTSND VGQVCLGDPT PTSDAAKIMY ISEEQQQQHS SSEPTFEVEL DPNTNSTTTT INNNGGDGVV VVSERNLSRS NSTGHCIVEE QGKGVERYTL
301: RLPEDVRRYI LVNHGRSVQR SASVKGVCWS DSEESYKGKR VNGEVRVEKR WVICTPPFVG HG
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.