Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P21340_001 | Banana | cytosol, nucleus, plastid | 86.36 | 82.94 |
| Zm00001d011122_P001 | Maize | cytosol | 78.51 | 77.55 |
| KXG19241 | Sorghum | nucleus | 72.31 | 71.14 |
| VIT_04s0023g03240.t01 | Wine grape | nucleus | 73.97 | 65.57 |
| KRH76662 | Soybean | nucleus | 75.21 | 65.23 |
| KRH28792 | Soybean | nucleus | 74.79 | 64.87 |
| Os06t0137300-01 | Rice | nucleus | 78.93 | 60.44 |
| KRH66164 | Soybean | extracellular, mitochondrion | 31.41 | 59.38 |
| TraesCS4A01G375100.1 | Wheat | nucleus, plastid | 74.79 | 58.96 |
| TraesCS7A01G076700.1 | Wheat | nucleus, plastid | 75.21 | 58.9 |
| Solyc02g084000.2.1 | Tomato | nucleus | 64.46 | 58.21 |
| TraesCS7D01G072400.2 | Wheat | nucleus | 74.38 | 57.51 |
| KRH55119 | Soybean | extracellular | 32.23 | 50.65 |
Protein Annotations
| MapMan:12.4.6.2 | MapMan:15.3.5.3.14 | Gene3D:2.60.40.1970 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G20410_001 | EnsemblPlants:GSMUA_Achr11P20410_001 | EnsemblPlants:GSMUA_Achr11T20410_001 | InterPro:IPR005033 | InterPro:IPR038704 |
| UniProt:M0RTX1 | PFAM:PF03366 | PFscan:PS51037 | PANTHER:PTHR23195 | PANTHER:PTHR23195:SF39 | UniParc:UPI000294EAB9 |
| InterPro:YEAST_sf | InterPro:YEATS | SEG:seg | : | : | : |
Description
transcription factor TFIIF, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G20410_001]
Coordinates
chr11:+:21403721..21405577
Molecular Weight (calculated)
27448.9 Da
IEP (calculated)
7.295
GRAVY (calculated)
-0.332
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFLNLLTQT RRLKDVEISF PIVYGTIAFW LGKKASEYNS HKWTVYVRGA TNEDLGVIVK RAVFQLHPSF NNPTRVVESA PFELSESGWG EFEIAIRLFF
101: HSDVCDKQLD LYHQLKLFPE DENGPQSIKK PVVVEIYDEI VFSEPTEALF ARVQNHPAAI VPRLPSGLNL PPPGPVNNIN EKKRGDTKDH PLNQWFMNFS
201: EADELLKLAA ARQYVQGHVG KLRRQLSMID GLPQLSKAAS GQ
101: HSDVCDKQLD LYHQLKLFPE DENGPQSIKK PVVVEIYDEI VFSEPTEALF ARVQNHPAAI VPRLPSGLNL PPPGPVNNIN EKKRGDTKDH PLNQWFMNFS
201: EADELLKLAA ARQYVQGHVG KLRRQLSMID GLPQLSKAAS GQ
001: MTNSSSSKKQ AQDQPETSEP TLKSLKTKMT KSDEKQKKLK DIEISVPIVY GNVAFWLGKK ASEYQSHKWA VYVRGATNED ISVVVKKVVF QLHSSFNSPT
101: RVIEEPPFEV SESGWGEFEI AMTLHFHSDV CDKPLSLYHH LKLYPEDESG PLTMKKPVVV ESYDEIVFPD PSESFLARVQ NHPALTFPRL PSGYNLPAPM
201: QVEDTGKKKR GDTKDHSLGQ WFMSFSEADE LLQLAAARQQ VQAHIAKLRR QISLLEGQNQ TVKTGSDL
101: RVIEEPPFEV SESGWGEFEI AMTLHFHSDV CDKPLSLYHH LKLYPEDESG PLTMKKPVVV ESYDEIVFPD PSESFLARVQ NHPALTFPRL PSGYNLPAPM
201: QVEDTGKKKR GDTKDHSLGQ WFMSFSEADE LLQLAAARQQ VQAHIAKLRR QISLLEGQNQ TVKTGSDL
Arabidopsis Description
TAF14BTranscription initiation factor TFIID subunit 14b [Source:UniProtKB/Swiss-Prot;Acc:Q9FH40]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.