CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66164	Soybean	extracellular, mitochondrion	53.9	64.84
KRH28792	Soybean	nucleus	60.39	33.33
KRH76662	Soybean	nucleus	59.74	32.97
Zm00001d011122_P001	Maize	cytosol	51.95	32.65
GSMUA_Achr11P...	Banana	mitochondrion	50.65	32.23
GSMUA_Achr5P21340_001	Banana	cytosol, nucleus, plastid	49.35	30.16
KXG19241	Sorghum	nucleus	48.05	30.08
KRH24348	Soybean	nucleus	52.6	29.67
VIT_04s0023g03240.t01	Wine grape	nucleus	51.95	29.3
Solyc02g084000.2.1	Tomato	nucleus	48.05	27.61
Os06t0137300-01	Rice	nucleus	50.65	24.68
TraesCS7A01G076700.1	Wheat	nucleus, plastid	48.7	24.27
TraesCS4A01G375100.1	Wheat	nucleus, plastid	48.05	24.1
TraesCS7D01G072400.2	Wheat	nucleus	48.7	23.96
KRH39814	Soybean	cytosol, nucleus	1.3	1.63

Protein Annotations

EMBL:ACUP02003887	EnsemblPlants:KRH55119	EnsemblPlantsGene:GLYMA_06G231700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005033	InterPro:YEATS	PANTHER:PTHR23195
PANTHER:PTHR23195:SF39	ProteinID:KRH55119	ProteinID:KRH55119.1	TMHMM:TMhelix	UniParc:UPI000294EDE2	UniProt:K7KWU1
MapMan:12.4.6.2	MapMan:15.3.5.3.14	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:36313689..36314855

Molecular Weight (calculated)

17673.2 Da

IEP (calculated)

5.137

GRAVY (calculated)

-0.093

Length

154 amino acids

Sequence
(BLAST)

001: MVSFLLVTWI WDLGDCIFLI TYVNGLCGYR YQHLKLYPED EYGPQSMKKP VVVESYNEIV FPEPSEVFLA RVQNHPAVNV PRLPAGLNLS CSGTFLSMLF
101: LFLLRGDTKD HPLTQWFLNF SEDDEILKLA AARQQQQFHQ VEARQQSSMN PASS

Best Arabidopsis Sequence Match ( AT5G45600.1 )
(BLAST)

001: MTNSSSSKKQ AQDQPETSEP TLKSLKTKMT KSDEKQKKLK DIEISVPIVY GNVAFWLGKK ASEYQSHKWA VYVRGATNED ISVVVKKVVF QLHSSFNSPT
101: RVIEEPPFEV SESGWGEFEI AMTLHFHSDV CDKPLSLYHH LKLYPEDESG PLTMKKPVVV ESYDEIVFPD PSESFLARVQ NHPALTFPRL PSGYNLPAPM
201: QVEDTGKKKR GDTKDHSLGQ WFMSFSEADE LLQLAAARQQ VQAHIAKLRR QISLLEGQNQ TVKTGSDL

Arabidopsis Description

TAF14BTranscription initiation factor TFIID subunit 14b [Source:UniProtKB/Swiss-Prot;Acc:Q9FH40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.