Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19533 | Sorghum | cytosol | 78.27 | 64.03 |
| EER93674 | Sorghum | cytosol | 78.44 | 63.99 |
| TraesCS7A01G351600.1 | Wheat | nucleus | 76.23 | 62.45 |
| TraesCS7B01G276500.1 | Wheat | cytosol | 76.23 | 62.45 |
| TraesCS7D01G371400.1 | Wheat | cytosol | 76.23 | 62.45 |
| Os05t0289400-01 | Rice | nucleus | 76.23 | 62.1 |
| TraesCS5B01G277100.1 | Wheat | cytosol, mitochondrion | 57.22 | 59.65 |
| Zm00001d033388_P001 | Maize | cytosol | 78.44 | 59.54 |
| TraesCS5D01G284700.1 | Wheat | cytosol, mitochondrion | 69.61 | 58.91 |
| Zm00001d013548_P002 | Maize | mitochondrion | 58.57 | 57.12 |
| HORVU7Hr1G089610.1 | Barley | nucleus, plastid | 76.4 | 56.75 |
| HORVU5Hr1G075030.1 | Barley | nucleus | 66.38 | 54.46 |
| Os06t0523900-00 | Rice | cytosol, plastid | 64.18 | 54.08 |
| Os10t0328700-01 | Rice | mitochondrion | 43.8 | 36.29 |
| GSMUA_Achr5P12800_001 | Banana | nucleus | 6.79 | 20.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P00740_001 | EnsemblPlants:GSMUA_Achr1T00740_001 | EnsemblPlantsGene:GSMUA_Achr1G00740_001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| InterPro:HAT | InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF3 | SEG:seg |
| SMART:SM00386 | SUPFAM:SSF48452 | UniParc:UPI000295B9F2 | UniProt:M0RVY2 | MapMan:16.4.5.2.6 | : |
Description
Putative Crooked neck-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G00740_001]
Coordinates
chr1:-:579568..584985
Molecular Weight (calculated)
70516.9 Da
IEP (calculated)
7.419
GRAVY (calculated)
-0.784
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDPNLGFL TKRDTEVKLP RPTRVKNKTP ATIQITAEQI LREARERQEP EIRPPKQKIT DYAAWEESQG DFARARSVWE RVLEVDYRNP TLWLKYAELE
101: MRHRFVNHAR NVWDRAVALL PRVDQLWYKY IHMEEMLGDL RYNEVDRARA IYERFWCKET ERARCIYRFS LDHVPKGRAE ELYRKYVAFE KQYGDRKGIE
201: DAIVSKRRFQ YEEEVRKNPL NYDCWFDYIR LEESVGNKDM VREVYERAIA NVPPAEEKRY WQRYIYLWIN YALYEELDAQ DMDRTREVYR ECLKLIPHKK
301: FSFAKIWLMA AQFEIRQMNL KGARKILGNA IGMAPKDKIF KKYIEIELQL GNITRCRTLY QKYLEWAPAN CYAWCKYAEL ERSLSETERA RSLFELAIAQ
401: PALDMPELLW KAYIDFEISE GEYERTRQLY ERLLDRTKHL KVWISYAKFE ASAGGDDEET DDEVLEKNDI NNEERQRKRI ERSRGVFERA FDYFRTSAPE
501: LKEERAMLLE DWLNTESSFG SLGDVSLVQK KLPRKVKKRR PISSEDGTPA GFEEYIDYIF ADEVAMAPNL KIMEAAYKWK RQKLGADDD
101: MRHRFVNHAR NVWDRAVALL PRVDQLWYKY IHMEEMLGDL RYNEVDRARA IYERFWCKET ERARCIYRFS LDHVPKGRAE ELYRKYVAFE KQYGDRKGIE
201: DAIVSKRRFQ YEEEVRKNPL NYDCWFDYIR LEESVGNKDM VREVYERAIA NVPPAEEKRY WQRYIYLWIN YALYEELDAQ DMDRTREVYR ECLKLIPHKK
301: FSFAKIWLMA AQFEIRQMNL KGARKILGNA IGMAPKDKIF KKYIEIELQL GNITRCRTLY QKYLEWAPAN CYAWCKYAEL ERSLSETERA RSLFELAIAQ
401: PALDMPELLW KAYIDFEISE GEYERTRQLY ERLLDRTKHL KVWISYAKFE ASAGGDDEET DDEVLEKNDI NNEERQRKRI ERSRGVFERA FDYFRTSAPE
501: LKEERAMLLE DWLNTESSFG SLGDVSLVQK KLPRKVKKRR PISSEDGTPA GFEEYIDYIF ADEVAMAPNL KIMEAAYKWK RQKLGADDD
001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
Arabidopsis Description
Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.