Factsheet for HORVU5Hr1G075030.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G277100.1	Wheat	cytosol, mitochondrion	69.36	88.14
TraesCS5D01G284700.1	Wheat	cytosol, mitochondrion	81.48	84.05
EER93674	Sorghum	cytosol	76.32	75.9
EES19533	Sorghum	cytosol	76.04	75.83
Os05t0289400-01	Rice	nucleus	75.91	75.38
Zm00001d013548_P002	Maize	mitochondrion	62.67	74.5
HORVU7Hr1G089610.1	Barley	nucleus, plastid	79.94	72.38
Zm00001d033388_P001	Maize	cytosol	76.46	70.75
GSMUA_Achr1P00740_001	Banana	cytosol	54.46	66.38
Os06t0523900-00	Rice	cytosol, plastid	63.79	65.52
KRH77629	Soybean	nucleus	61.56	63.6
KRH27855	Soybean	nucleus	61.56	63.6
Solyc12g056080.1.1	Tomato	nucleus	61.14	63.35
PGSC0003DMT400012873	Potato	cytosol	61.14	63.35
VIT_02s0025g01160.t01	Wine grape	cytosol	61.98	63.3
CDY16320	Canola	cytosol, mitochondrion	16.85	62.37
Solyc03g007560.2.1	Tomato	cytosol, mitochondrion	57.24	61.9
PGSC0003DMT400072653	Potato	cytosol, mitochondrion, nucleus, plastid	57.1	61.56
PGSC0003DMT400024585	Potato	cytosol	52.65	61.36
Solyc03g007850.1.1	Tomato	mitochondrion	57.38	61.22
AT5G41770.1	Thale cress	nucleus	60.03	61.13
AT5G45990.2	Thale cress	nucleus	57.94	60.91
Bra028504.1-P	Field mustard	nucleus	59.89	60.91
CDY27682	Canola	nucleus	56.41	60.72
CDY49876	Canola	nucleus	56.41	60.72
CDX67505	Canola	nucleus	56.27	60.57
CDY35016	Canola	nucleus	57.38	60.5
Bra025462.1-P	Field mustard	nucleus	59.47	60.48
CDX89268	Canola	cytosol	10.59	60.32
CDY51192	Canola	cytosol	12.12	60.0
AT3G51110.1	Thale cress	cytosol	34.26	59.56
CDY49874	Canola	mitochondrion	11.84	59.44
CDY38549	Canola	extracellular	6.69	59.26
AT3G13210.1	Thale cress	nucleus	52.79	57.69
CDY63724	Canola	plastid	51.95	57.12
Bra031930.1-P	Field mustard	cytosol	52.92	56.97
CDY31331	Canola	cytosol, nucleus, plastid	50.84	56.59
PGSC0003DMT400016837	Potato	mitochondrion	20.2	55.77
CDX94039	Canola	nucleus	49.72	55.69
Bra038885.1-P	Field mustard	nucleus	24.65	55.66
CDX98687	Canola	endoplasmic reticulum, nucleus, plastid	32.59	55.06
PGSC0003DMT400015907	Potato	cytosol	12.81	50.83
Solyc10g050500.1.1	Tomato	cytosol	4.6	47.83
CDY14715	Canola	cytosol	12.53	42.65
Bra023285.1-P	Field mustard	mitochondrion	9.05	39.63
PGSC0003DMT400041076	Potato	nucleus	11.0	38.73
CDX93820	Canola	cytosol	9.33	35.83
CDY16319	Canola	nucleus	3.62	29.89

Protein Annotations

EnsemblPlants:HORVU5Hr1G075030.1	EnsemblPlantsGene:HORVU5Hr1G075030	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:HAT
InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR11246	PANTHER:PTHR11246:SF3	PFAM:PF02184	SEG:seg
SMART:SM00386	SUPFAM:SSF48452	UniParc:UPI000B46976F	UniProt:A0A287RTQ1	MapMan:16.4.5.2.6	:

Description

No Description!

Coordinates

chrchr5H:+:545947876..545955735

Molecular Weight (calculated)

85046.7 Da

IEP (calculated)

8.824

GRAVY (calculated)

-0.817

Length

718 amino acids

Sequence
(BLAST)

001: LTLARTPATG HGARHHPQRR RCRPSEPRPP HKPRYGGQAA PRDAGEEQGA RRGPDHRPEA RERQEPEIRP PRQRIADADE LAGYRLRERK RFEGLVARGG
101: VPAWVKYARW EEGQGDLARA RSVYERALDL DAARRDHALW LKYAEFEMRN RCVNHARNAW DRAVALLPRV DQLWHKYIHM EELLGAVANA RRLFERWMAW
201: RPDVAAWSSY VKFELRYGEV ERARAIYERI VAEHPRPDTF VRYAKFEMKH GGVDRARRVY ERASELLVDD EDAEVLFVAF AEFEEHRREV ERARAIYKYA
301: LDRVPKGRAE DLYRKFLAFE KRFGDRVGIE DAIVGKQRFQ YEDEVRKNPL NYDSWFDYMR LEESVGDKDR IRDVYERAID LSPPAQEKRY WQRYIYLWIN
401: YALYEELDAR DMERTREVYR ACLKLVPHKK FTFAKLWLMA AQFEIRQKNM KAARRILGNA IGMAPQGKLF KEYIEIELHL GNFDRCRILY EKYIEWSHAN
501: CYAWNKYAEF EKNLGEADRA RSVYELAIAQ PALDMPEVLW KEYLQFEIDE GEFGRARELF ERLLDRTKHL KVWISYAEFE ASAGLGGDNG SEVNKNHAGY
601: QEQQIERVRR CRAVFERAFD YFRTNAAELK EERAMLLEEW LKKELGFGDL GDVALVQKKV PRKVKRKRPL PTDDGSNVAY EEYVDYIFPD EVTLASSLKI
701: LEAAYKWKKQ KTDDTDDD

Best Arabidopsis Sequence Match ( AT5G41770.1 )
(BLAST)

001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD

Arabidopsis Description

Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.