Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31331 | Canola | cytosol, nucleus, plastid | 86.06 | 87.13 |
| CDY49876 | Canola | nucleus | 68.76 | 67.32 |
| CDY27682 | Canola | nucleus | 68.76 | 67.32 |
| CDY35016 | Canola | nucleus | 70.14 | 67.25 |
| CDX67505 | Canola | nucleus | 68.3 | 66.87 |
| CDY49874 | Canola | mitochondrion | 14.4 | 65.73 |
| CDX89268 | Canola | cytosol | 12.1 | 62.7 |
| AT3G51110.1 | Thale cress | cytosol | 39.36 | 62.23 |
| CDX94039 | Canola | nucleus | 60.95 | 62.09 |
| CDY16319 | Canola | nucleus | 8.12 | 60.92 |
| CDX98687 | Canola | endoplasmic reticulum, nucleus, plastid | 39.2 | 60.24 |
| CDY16320 | Canola | cytosol, mitochondrion | 17.76 | 59.79 |
| EES19533 | Sorghum | cytosol | 64.62 | 58.61 |
| EER93674 | Sorghum | cytosol | 64.47 | 58.31 |
| CDY38549 | Canola | extracellular | 7.2 | 58.02 |
| Os05t0289400-01 | Rice | nucleus | 63.71 | 57.54 |
| CDY51192 | Canola | cytosol | 12.71 | 57.24 |
| TraesCS7A01G351600.1 | Wheat | nucleus | 62.79 | 57.02 |
| TraesCS7B01G276500.1 | Wheat | cytosol | 62.63 | 56.88 |
| TraesCS7D01G371400.1 | Wheat | cytosol | 62.63 | 56.88 |
| Zm00001d013548_P002 | Maize | mitochondrion | 51.45 | 55.63 |
| Zm00001d033388_P001 | Maize | cytosol | 64.78 | 54.51 |
| TraesCS5B01G277100.1 | Wheat | cytosol, mitochondrion | 47.01 | 54.34 |
| TraesCS5D01G284700.1 | Wheat | cytosol, mitochondrion | 56.97 | 53.45 |
| HORVU5Hr1G075030.1 | Barley | nucleus | 57.12 | 51.95 |
| HORVU7Hr1G089610.1 | Barley | nucleus, plastid | 62.48 | 51.45 |
| Os06t0523900-00 | Rice | cytosol, plastid | 53.45 | 49.93 |
| CDY14715 | Canola | cytosol | 13.48 | 41.71 |
| Os10t0328700-01 | Rice | mitochondrion | 40.12 | 36.85 |
| CDX93820 | Canola | cytosol | 9.95 | 34.76 |
| GSMUA_Achr5P12800_001 | Banana | nucleus | 5.21 | 17.0 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.4.5.2.6 | GO:A0A078JBY2 | UniProt:A0A078JBY2 | EnsemblPlants:CDY63724 | ProteinID:CDY63724 |
| ProteinID:CDY63724.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0006397 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00039580001 | InterPro:HAT | InterPro:IPR011990 | PFAM:PF05843 |
| PANTHER:PTHR11246 | PANTHER:PTHR11246:SF3 | SMART:SM00386 | SUPFAM:SSF48452 | InterPro:Suf | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI0004EE8D3A | SEG:seg | : | : | : | : |
Description
BnaC02g48840DBnaC02g48840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBY2]
Coordinates
chrLK034343:+:22617..24657
Molecular Weight (calculated)
78018.8 Da
IEP (calculated)
7.353
GRAVY (calculated)
-0.711
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFAKDTQV KLPRPTRVKN KTPAPLQITA EQLLREARER QESQILPPQQ NITDSTELSD YRLRLRKEYE DRIRRPGPST QVFVNYARWE ESQKDYVRAR
101: SVWERALARD YKNHALWLKY ADFEMKNKFL NSARNVWDRA VTVLPRVDQF WYKYIHMEEM LGNISGARDI FERDVYERFV LSHPKPSSYI QYAKFEAKGG
201: EVARARDVYE RAVKNLGDDE DLFVAFAEFE ERCNEVERAR VIYKFGLDRV GRGEELYRKF VAFEKQYGDK EGIDDVIVGR RRVEYEEQVR KSPLNYDAWF
301: DYVRLEEEEA SSVGDKERVR EVYERAIANV PPANEKRYWR RYIYLWINYA LYEEIEAEDV ERARQVYREC LKLVPHARFS FAKIWLLAAQ FEIRQLNLKG
401: CRKLLGNAIG IAPNKDKIFK KYIEMELQLG EIDRCRRLYE RYLVWSRDNC YVWCKFAEFE SSLEEIERAR GIFELAVSQT TLDLPELVWK GYIDFEMSQG
501: EVERTRALYK RLLERTKHYK VWVSFAKFEA GEQDEDEEED IERKRECIRR TRAVFDRAYV YYKDVIPEMK EERAKLLEDW FNMEVGFGML GDVSIVESKL
601: PKKLKKRKAI TGEDGSVEYV EYTDYLFPEE LKASNLKILE AACRWKKQKV DAV
101: SVWERALARD YKNHALWLKY ADFEMKNKFL NSARNVWDRA VTVLPRVDQF WYKYIHMEEM LGNISGARDI FERDVYERFV LSHPKPSSYI QYAKFEAKGG
201: EVARARDVYE RAVKNLGDDE DLFVAFAEFE ERCNEVERAR VIYKFGLDRV GRGEELYRKF VAFEKQYGDK EGIDDVIVGR RRVEYEEQVR KSPLNYDAWF
301: DYVRLEEEEA SSVGDKERVR EVYERAIANV PPANEKRYWR RYIYLWINYA LYEEIEAEDV ERARQVYREC LKLVPHARFS FAKIWLLAAQ FEIRQLNLKG
401: CRKLLGNAIG IAPNKDKIFK KYIEMELQLG EIDRCRRLYE RYLVWSRDNC YVWCKFAEFE SSLEEIERAR GIFELAVSQT TLDLPELVWK GYIDFEMSQG
501: EVERTRALYK RLLERTKHYK VWVSFAKFEA GEQDEDEEED IERKRECIRR TRAVFDRAYV YYKDVIPEMK EERAKLLEDW FNMEVGFGML GDVSIVESKL
601: PKKLKKRKAI TGEDGSVEYV EYTDYLFPEE LKASNLKILE AACRWKKQKV DAV
001: MMMIPRMVKN KTPAPVQITA EQVLKEARER EDSRILRPPK QKITDSDELA EYRLRRRKEF EDQIRGAKTN SQVWVRYADW EESQKDHDRA RSVWERALED
101: ESYRNHTLWL KYAEFEMRNK SVNHARNVWD RAVKILPRVD QFWYKYIHME EILGNIDGAR KIFERWMDWS PDQQAWLCFI KFELRYNEIE RSRSIYERFV
201: LCHPKASSFI RYAKFEMKNS QVSLARIVYE RAIEMLKDVE EEAEMIFVAF AEFEELCKEV ERARFLYKYA LDHIPKGRAE DLYKKFVAFE KQYGNKEGID
301: DAIVGRRKLQ YEGEVRKNPL NYDSWFDYIS LEETLGDKDR IREVYERAIA NVPLAEEKRY WQRYIYLWID YALFEEILAE DVERTRAVYR ECLNLIPSLQ
401: ILFCQDMVAR CTV
101: ESYRNHTLWL KYAEFEMRNK SVNHARNVWD RAVKILPRVD QFWYKYIHME EILGNIDGAR KIFERWMDWS PDQQAWLCFI KFELRYNEIE RSRSIYERFV
201: LCHPKASSFI RYAKFEMKNS QVSLARIVYE RAIEMLKDVE EEAEMIFVAF AEFEELCKEV ERARFLYKYA LDHIPKGRAE DLYKKFVAFE KQYGNKEGID
301: DAIVGRRKLQ YEGEVRKNPL NYDSWFDYIS LEETLGDKDR IREVYERAIA NVPLAEEKRY WQRYIYLWID YALFEEILAE DVERTRAVYR ECLNLIPSLQ
401: ILFCQDMVAR CTV
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J390]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.