Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27682 | Canola | nucleus | 99.4 | 99.4 |
| CDX67505 | Canola | nucleus | 96.85 | 96.85 |
| CDY35016 | Canola | nucleus | 98.2 | 96.18 |
| Bra025462.1-P | Field mustard | nucleus | 98.95 | 93.48 |
| AT5G41770.1 | Thale cress | nucleus | 92.2 | 87.23 |
| CDY49874 | Canola | mitochondrion | 17.69 | 82.52 |
| CDX89268 | Canola | cytosol | 15.29 | 80.95 |
| CDY38549 | Canola | extracellular | 9.6 | 79.01 |
| CDX94039 | Canola | nucleus | 73.16 | 76.13 |
| CDY51192 | Canola | cytosol | 16.49 | 75.86 |
| CDY16320 | Canola | cytosol, mitochondrion | 21.59 | 74.23 |
| CDX98687 | Canola | endoplasmic reticulum, nucleus, plastid | 46.48 | 72.94 |
| CDY63724 | Canola | plastid | 67.32 | 68.76 |
| EES19533 | Sorghum | cytosol | 71.66 | 66.39 |
| CDY31331 | Canola | cytosol, nucleus, plastid | 64.02 | 66.2 |
| EER93674 | Sorghum | cytosol | 71.51 | 66.07 |
| Os05t0289400-01 | Rice | nucleus | 71.06 | 65.56 |
| TraesCS7D01G371400.1 | Wheat | cytosol | 70.16 | 65.09 |
| TraesCS7B01G276500.1 | Wheat | cytosol | 70.16 | 65.09 |
| TraesCS7A01G351600.1 | Wheat | nucleus | 70.16 | 65.09 |
| TraesCS5B01G277100.1 | Wheat | cytosol, mitochondrion | 53.67 | 63.36 |
| CDY16319 | Canola | nucleus | 8.25 | 63.22 |
| Zm00001d013548_P002 | Maize | mitochondrion | 57.12 | 63.08 |
| Zm00001d033388_P001 | Maize | cytosol | 71.51 | 61.47 |
| TraesCS5D01G284700.1 | Wheat | cytosol, mitochondrion | 62.52 | 59.91 |
| Os06t0523900-00 | Rice | cytosol, plastid | 62.07 | 59.23 |
| HORVU7Hr1G089610.1 | Barley | nucleus, plastid | 69.87 | 58.76 |
| HORVU5Hr1G075030.1 | Barley | nucleus | 60.72 | 56.41 |
| CDY14715 | Canola | cytosol | 16.94 | 53.55 |
| CDX93820 | Canola | cytosol | 11.69 | 41.71 |
| Os10t0328700-01 | Rice | mitochondrion | 40.33 | 37.83 |
| GSMUA_Achr5P12800_001 | Banana | nucleus | 6.15 | 20.5 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.4.5.2.6 | GO:A0A078IIU0 | UniProt:A0A078IIU0 | EnsemblPlants:CDY49876 | ProteinID:CDY49876 |
| ProteinID:CDY49876.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00094015001 | InterPro:HAT |
| InterPro:IPR011990 | PFAM:PF02184 | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF3 | SMART:SM00386 | SUPFAM:SSF48452 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EF3E66 | SEG:seg | : | : | : |
Description
BnaA04g11380DBnaA04g11380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIU0]
Coordinates
chrLK032865:-:43996..47271
Molecular Weight (calculated)
80053.7 Da
IEP (calculated)
5.810
GRAVY (calculated)
-0.859
Length
667 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGKDSDRT LGYMTRKDTE VKLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK QKITDSTELS DYRLRRRKEF EDKIRRARWN IQGDYRNHTL
101: WLKYAENVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMQWS PDQQGWLSFI KFELRYNEIE RARSIYERFV LCHPKVSAYI RFAKFEMKGG
201: EVARARHVYE RATEKLADDE EAETLFVAFA EFEERCKEPE RARFIYKFAL DHIPKGRAED LYKKFVAFEK QYGDREGIED AIVGKRRFQY EDEVRKNPLN
301: YDSWFDYVRL EETVGNKDRI REIYERAIAN IPPAEEKRYW QRYIYLWINY ALYEEIETED VERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLA
401: GARQILGNAI GKAPKDKIFK KYIEIELQLG NIDRCRKLYE RYLEWSPENC YAWSKYAELE RSLAETERAR AIFELAISQP ALDMPELLWK AYIDFEIAEG
501: ELERTRALYE RLLDRTKHYK VWVSFAKFEA SSAEQEEDEE EEPQEEIDAT ERKKECIRRA REIFERANSY YKDSAPELKE ERATLLEDWL NMETNFGNLG
601: DVSVVQSKLP KKLKKRKPIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKLA ASEEDYD
101: WLKYAENVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMQWS PDQQGWLSFI KFELRYNEIE RARSIYERFV LCHPKVSAYI RFAKFEMKGG
201: EVARARHVYE RATEKLADDE EAETLFVAFA EFEERCKEPE RARFIYKFAL DHIPKGRAED LYKKFVAFEK QYGDREGIED AIVGKRRFQY EDEVRKNPLN
301: YDSWFDYVRL EETVGNKDRI REIYERAIAN IPPAEEKRYW QRYIYLWINY ALYEEIETED VERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLA
401: GARQILGNAI GKAPKDKIFK KYIEIELQLG NIDRCRKLYE RYLEWSPENC YAWSKYAELE RSLAETERAR AIFELAISQP ALDMPELLWK AYIDFEIAEG
501: ELERTRALYE RLLDRTKHYK VWVSFAKFEA SSAEQEEDEE EEPQEEIDAT ERKKECIRRA REIFERANSY YKDSAPELKE ERATLLEDWL NMETNFGNLG
601: DVSVVQSKLP KKLKKRKPIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKLA ASEEDYD
001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
Arabidopsis Description
Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.