CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031930.1-P	Field mustard	cytosol	93.8	90.7
CDY63724	Canola	plastid	87.13	86.06
CDY49874	Canola	mitochondrion	14.73	66.43
CDY35016	Canola	nucleus	67.6	64.02
CDY27682	Canola	nucleus	66.2	64.02
CDY49876	Canola	nucleus	66.2	64.02
CDX67505	Canola	nucleus	65.74	63.57
CDY38549	Canola	extracellular	7.91	62.96
CDX89268	Canola	cytosol	12.25	62.7
CDY16319	Canola	nucleus	8.06	59.77
CDX94039	Canola	nucleus	59.22	59.59
CDY51192	Canola	cytosol	13.33	59.31
CDX98687	Canola	endoplasmic reticulum, nucleus, plastid	38.29	58.12
EES19533	Sorghum	cytosol	64.81	58.06
EER93674	Sorghum	cytosol	64.65	57.76
AT3G51110.1	Thale cress	cytosol	36.43	56.9
Os05t0289400-01	Rice	nucleus	63.41	56.57
TraesCS7A01G351600.1	Wheat	nucleus	62.64	56.19
TraesCS7D01G371400.1	Wheat	cytosol	62.48	56.05
TraesCS7B01G276500.1	Wheat	cytosol	62.48	56.05
Zm00001d013548_P002	Maize	mitochondrion	51.16	54.64
Zm00001d033388_P001	Maize	cytosol	64.65	53.74
TraesCS5D01G284700.1	Wheat	cytosol, mitochondrion	57.05	52.87
TraesCS5B01G277100.1	Wheat	cytosol, mitochondrion	46.2	52.74
HORVU5Hr1G075030.1	Barley	nucleus	56.59	50.84
HORVU7Hr1G089610.1	Barley	nucleus, plastid	62.33	50.69
CDY16320	Canola	cytosol, mitochondrion	14.88	49.48
Os06t0523900-00	Rice	cytosol, plastid	53.02	48.93
CDY14715	Canola	cytosol	13.8	42.18
Os10t0328700-01	Rice	mitochondrion	40.31	36.57
CDX93820	Canola	cytosol	9.61	33.16
GSMUA_Achr5P12800_001	Banana	nucleus	4.81	15.5

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.4.5.2.6	GO:A0A078H0N5	UniProt:A0A078H0N5	EnsemblPlants:CDY31331	ProteinID:CDY31331
ProteinID:CDY31331.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006396	GO:GO:0006397	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00047513001	InterPro:HAT	InterPro:IPR011990	InterPro:IPR013026
PFAM:PF05843	PFscan:PS50293	PANTHER:PTHR11246	PANTHER:PTHR11246:SF3	SMART:SM00386	SUPFAM:SSF48452
InterPro:Suf	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EF217E	SEG:seg	:

Description

BnaA02g34100DBnaA02g34100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0N5]

Coordinates

chrLK032270:+:264272..266329

Molecular Weight (calculated)

76911.4 Da

IEP (calculated)

5.792

GRAVY (calculated)

-0.685

Length

645 amino acids

Sequence
(BLAST)

001: MASFAKDTHV KLPRPTRVKN ETPAPLQITA EQLLREARER QESQILPPYQ NITDPTELSD YRLRLRKEFE DRIRLPGPST QVWLNYARWE ESQKDYARAR
101: SVWERALQAD YRNHAVWVKY AEFEMRNMFV NSARNVWDRA VTVLPRVDQL WYKYIHMEEM LGNISGAREV FERFVIKKPH VREISTRGEV ARARDVYERA
201: VKNLGDDEEL FVAFAEFEER CKEVERARVI YKFGLDRVGR GEELYKKFVA FEKQHGDKER IDDVIVGRRR VEYEEQVRKS PLNYDAWFDY VRLEEEEASS
301: VGDKERVREV YERAVGNVPP ANEKRYWRRY IYLWINYALF EEIEAEDVDR ARQVYRECLK LVPHASFSFA KIWLLAAQFE IRQLNLTAAR KILGNGIGKA
401: TNKDKIFKKY IEIELELGEI DRCRRLYEKY LEWSPDNCYV WCKYAEFEIS LEETERARGI FELAVSQTTL DLPEVLWKGY IDFEMSQGEV ERTRALYERL
501: LERTKHYKVW VSFAKFEAGE QDEDEEEDGI ERKQECIRRT RAVFDRAYVY YKEVIPEMKE ERSTLLEEWL NMEMSFGMLG DVSIVKSKLP KKLKKRKAIT
601: GEDGSVEYVE YTDYLFPEEL EASNLKILEA AIRWKKQKVG AFCNV

Best Arabidopsis Sequence Match ( AT3G13210.1 )
(BLAST)

001: MASGKDSDRN LGYMTRKDAE LKLPRMTQVK NKTPAPIQIT AEQILREARE RQEAEFRPPN QTITDSAELS DYRLRRRKEF EDQIRRARLN TQVWVKYADF
101: EMKNKSVNEA RNVWDRAVSL LPRVDQLWYK FIHMEEKLGN IAGARQILER WIHCSPDQQA WLCFIKFELK YNEIECARSI YERFVLCHPK VSAYIRYAKF
201: EMKHGQVELA MKVFERAKKE LADDEEAEIL FVAFAEFEEQ YKFALDQIPK GRAENLYSKF VAFEKQNGDK EGIEDAIIGK RRCQYEDEVR KNPLNYDSWF
301: DFVRLEETVG NKDRIREIYE RAVANVPPPE AQEKRYWQRY IYLWINYAFF AEMVTEDVES TRDVYRACLK LIPHSKFSFA KIWLLAAQHE IRQLNLTGAR
401: QILGNAIGKA PKDKIFKKYI EIELQLRNID RCRKLYERYL EWSPGNCYAW RKYAEFEMSL AETERTRAIF ELAISQPALD MPELLWKTYI DFEISEGELE
501: RTRALYERLL DRTKHCKVWV DFAKFEASAA EHKEDEEEED AIERKKDGIK RAREIFDRAN TYNKDSTPEL KEERAMLLED WLNMETGFGK LGDVRVVQSK
601: LPKKVKKRKL SSREDGCTEY EEYTDYLFPE ESETTSLKIL EAAHKWKKQK VKAGECV

Arabidopsis Description

Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JC74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.