Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67505 | Canola | nucleus | 97.36 | 99.4 |
| CDY49876 | Canola | nucleus | 96.18 | 98.2 |
| CDY27682 | Canola | nucleus | 96.04 | 98.05 |
| AT5G41770.1 | Thale cress | nucleus | 92.8 | 89.65 |
| CDY49874 | Canola | mitochondrion | 17.33 | 82.52 |
| CDX89268 | Canola | cytosol | 14.98 | 80.95 |
| CDX94039 | Canola | nucleus | 74.45 | 79.1 |
| CDY38549 | Canola | extracellular | 9.4 | 79.01 |
| CDY51192 | Canola | cytosol | 16.3 | 76.55 |
| CDY16320 | Canola | cytosol, mitochondrion | 21.29 | 74.74 |
| CDX98687 | Canola | endoplasmic reticulum, nucleus, plastid | 46.11 | 73.88 |
| CDY63724 | Canola | plastid | 67.25 | 70.14 |
| EES19533 | Sorghum | cytosol | 71.51 | 67.64 |
| CDY31331 | Canola | cytosol, nucleus, plastid | 64.02 | 67.6 |
| EER93674 | Sorghum | cytosol | 71.37 | 67.31 |
| Os05t0289400-01 | Rice | nucleus | 71.07 | 66.94 |
| TraesCS7D01G371400.1 | Wheat | cytosol | 69.9 | 66.2 |
| TraesCS7B01G276500.1 | Wheat | cytosol | 69.9 | 66.2 |
| TraesCS7A01G351600.1 | Wheat | nucleus | 69.9 | 66.2 |
| Zm00001d013548_P002 | Maize | mitochondrion | 57.12 | 64.4 |
| TraesCS5B01G277100.1 | Wheat | cytosol, mitochondrion | 52.86 | 63.72 |
| CDY16319 | Canola | nucleus | 8.08 | 63.22 |
| Zm00001d033388_P001 | Maize | cytosol | 71.37 | 62.63 |
| TraesCS5D01G284700.1 | Wheat | cytosol, mitochondrion | 62.41 | 61.06 |
| HORVU7Hr1G089610.1 | Barley | nucleus, plastid | 69.6 | 59.77 |
| Os06t0523900-00 | Rice | cytosol, plastid | 60.65 | 59.08 |
| HORVU5Hr1G075030.1 | Barley | nucleus | 60.5 | 57.38 |
| CDY14715 | Canola | cytosol | 16.74 | 54.03 |
| CDX93820 | Canola | cytosol | 11.89 | 43.32 |
| Os10t0328700-01 | Rice | mitochondrion | 40.68 | 38.96 |
| GSMUA_Achr5P12800_001 | Banana | nucleus | 6.17 | 21.0 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.4.5.2.6 | GO:A0A078HBD7 | UniProt:A0A078HBD7 | EnsemblPlants:CDY35016 | ProteinID:CDY35016 |
| ProteinID:CDY35016.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00057852001 | InterPro:HAT |
| InterPro:IPR011990 | PFAM:PF02184 | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF3 | SMART:SM00386 | SUPFAM:SSF48452 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EE963C | SEG:seg | : | : | : |
Description
BnaC06g13700DBnaC06g13700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBD7]
Coordinates
chrLK032345:-:19458..22808
Molecular Weight (calculated)
81813.8 Da
IEP (calculated)
5.793
GRAVY (calculated)
-0.840
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGKDSDRT LGYMTRKDTE VKLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK QKITDSTELS DYRLRRRKEF EDQIRRARWN IQVWMKYAHV
101: WERAIEGDYR NHTLWLKYAE NVWDRAVTLL PRVDQLWYKY IHMEEILGNI AGARQIFERW MQWSPDQQGW LSFIKFELRY NEIERARSIY ERFVLCHPKV
201: SAYIRFAKFE MKGGEVARAR HVYERATEKL ADDEEAETLF VAFAEFEERC KEPERARFIY KFALDHIPKG RAEDLYKKFV AFEKQYGDKE GIEDAIVGKR
301: RFQYEDEVRK NPLNYDSWFD YVRLEETVGN KDRIREIYER AIANIPPAEE KRYWQRYIYL WINYALYEEI ETEDVERTRD VYRECLKLIP HSKFSFAKIW
401: LLAAQFEIRQ LNLAGARQIL GNAIGKAPKD KIFKKYIEIE LQLGNIDRCR KLYERYLEWS PENCYAWSKY AELERSLAET ERARAIFELA ISQPALDMPE
501: LLWKAYIDFE IAEGELERTR ALYERLLDRT KHYKVWVSFA KFEASAAEQE EDEEEEDQEE TDAIERKKEC IRRARAIFER ANSYYKDSAP ELKEERATLL
601: EDWLNMETNF GNLGDVSVVQ SKLPKKLKKR KPITREDGST EYEEYIDYLY PEESQTTNLK ILEAAYKWKK QKLATSEEEY D
101: WERAIEGDYR NHTLWLKYAE NVWDRAVTLL PRVDQLWYKY IHMEEILGNI AGARQIFERW MQWSPDQQGW LSFIKFELRY NEIERARSIY ERFVLCHPKV
201: SAYIRFAKFE MKGGEVARAR HVYERATEKL ADDEEAETLF VAFAEFEERC KEPERARFIY KFALDHIPKG RAEDLYKKFV AFEKQYGDKE GIEDAIVGKR
301: RFQYEDEVRK NPLNYDSWFD YVRLEETVGN KDRIREIYER AIANIPPAEE KRYWQRYIYL WINYALYEEI ETEDVERTRD VYRECLKLIP HSKFSFAKIW
401: LLAAQFEIRQ LNLAGARQIL GNAIGKAPKD KIFKKYIEIE LQLGNIDRCR KLYERYLEWS PENCYAWSKY AELERSLAET ERARAIFELA ISQPALDMPE
501: LLWKAYIDFE IAEGELERTR ALYERLLDRT KHYKVWVSFA KFEASAAEQE EDEEEEDQEE TDAIERKKEC IRRARAIFER ANSYYKDSAP ELKEERATLL
601: EDWLNMETNF GNLGDVSVVQ SKLPKKLKKR KPITREDGST EYEEYIDYLY PEESQTTNLK ILEAAYKWKK QKLATSEEEY D
001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
Arabidopsis Description
Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.