Factsheet for Os10t0328700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0289400-01	Rice	nucleus	46.13	45.37
Bra038885.1-P	Field mustard	nucleus	20.25	45.28
AT3G51110.1	Thale cress	cytosol	26.3	45.28
CDY16320	Canola	cytosol, mitochondrion	11.96	43.81
GSMUA_Achr1P00740_001	Banana	cytosol	36.29	43.8
CDY38549	Canola	extracellular	4.92	43.21
KRH27855	Soybean	nucleus	41.49	42.45
KRH77629	Soybean	nucleus	41.49	42.45
Solyc12g056080.1.1	Tomato	nucleus	40.79	41.85
PGSC0003DMT400012873	Potato	cytosol	40.79	41.85
PGSC0003DMT400072653	Potato	cytosol, mitochondrion, nucleus, plastid	39.1	41.74
Solyc03g007560.2.1	Tomato	cytosol, mitochondrion	38.68	41.42
VIT_02s0025g01160.t01	Wine grape	cytosol	40.79	41.25
Bra028504.1-P	Field mustard	nucleus	40.93	41.22
Bra025462.1-P	Field mustard	nucleus	40.79	41.08
AT5G45990.2	Thale cress	nucleus	39.38	41.0
Solyc03g007850.1.1	Tomato	mitochondrion	38.68	40.86
CDY35016	Canola	nucleus	38.96	40.68
CDY49876	Canola	nucleus	37.83	40.33
CDY31331	Canola	cytosol, nucleus, plastid	36.57	40.31
AT5G41770.1	Thale cress	nucleus	39.94	40.28
PGSC0003DMT400024585	Potato	cytosol	34.88	40.26
CDY16319	Canola	nucleus	4.92	40.23
Bra031930.1-P	Field mustard	cytosol	37.69	40.18
CDX67505	Canola	nucleus	37.69	40.18
CDY27682	Canola	nucleus	37.69	40.18
CDY63724	Canola	plastid	36.85	40.12
PGSC0003DMT400015907	Potato	cytosol	10.13	39.78
Os06t0523900-00	Rice	cytosol, plastid	38.96	39.63
PGSC0003DMT400016837	Potato	mitochondrion	14.35	39.23
CDX89268	Canola	cytosol	6.89	38.89
CDX94039	Canola	nucleus	34.88	38.69
AT3G13210.1	Thale cress	nucleus	34.88	37.75
Solyc10g050500.1.1	Tomato	cytosol	3.66	37.68
CDY51192	Canola	cytosol	7.45	36.55
CDX98687	Canola	endoplasmic reticulum, nucleus, plastid	18.99	31.76
CDY49874	Canola	mitochondrion	6.33	31.47
CDX93820	Canola	cytosol	7.59	28.88
CDY14715	Canola	cytosol	8.16	27.49
Bra023285.1-P	Field mustard	mitochondrion	6.33	27.44
PGSC0003DMT400041076	Potato	nucleus	7.59	26.47

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.4.5.2.6	EntrezGene:4348330	ProteinID:AAM19061.1	ProteinID:AAP53003.1	EMBL:AK070180
ProteinID:BAF26273.1	ProteinID:BAT10350.1	GO:GO:0000245	GO:GO:0000974	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006396	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0071010
GO:GO:0071011	GO:GO:0071012	GO:GO:0071013	GO:GO:0071014	InterPro:HAT	InterPro:IPR011990
EnsemblPlantsGene:Os10g0328700	EnsemblPlants:Os10t0328700-01	PANTHER:PTHR11246	PANTHER:PTHR11246:SF3	UniProt:Q8S5Y7	SMART:SM00386
SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000009EBA2	RefSeq:XP_015613378.1	SEG:seg	:

Description

Tetratricopeptide-like helical domain containing protein. (Os10t0328700-01)

Coordinates

chr10:+:9213110..9215332

Molecular Weight (calculated)

79989.6 Da

IEP (calculated)

8.240

GRAVY (calculated)

-0.506

Length

711 amino acids

Sequence
(BLAST)

001: MLPTPRRVKN KAPAPVQLTA EHLIREAREL HGDGSVTVCL PAESKKRRIV DADELAEHRL ERRARFEAIV RRAGSGRGGC GDASSEWMRY ARWEESPGGG
101: GGDPARARSV YERALAGGAP AYRDHGVWIK YAQFEARGGR VGHARNVLDR AVAILPRADR IWSEYLRMED LLGATDNARV VFDRWTSWRP GADAWAAYAA
201: FELRHGELDR ARAVHERHVA ALPCADAFIL FAEFETKLKN LDRAPRVYEH AGSLLAAAGD NDDTAVLLAA FADFEERCGE PDRARAIYQH ALRGEPPEPR
301: AEELREKLLS LEKRFGDRHG VEDSIVTKRR SQYERAVTTN PLCYDAWFDL IRLEESANTG DANRIRDLYR RAVANVPPAA AAAEKRHWRR YIYLWINYAL
401: FEELDAEDVA RARGVYRECL RTIPHKKFSF SNICVMAAEL EIRDKNLAAA RRLLGNAIGV APRPKLSRRY IEIELQLGNV GRCRILSQKF IEHAPSSSHV
501: WRSYAALEKK LGETDRARSV YDLAVSQPAL DAPELVWTDY IQFEIDAGEL DRARQLYERL LGKTQHLNVW VSYAEFEATA CSGGAAIAGN AAEKAERVRR
601: CRAVCRRADE HFRGCADDPA MKEARAMLLQ QWLAKEAAFG DLGEVEPVEK KTPRRVKRKR SLLADGNGGG GGCEEFFDYI FGDEEDATAA AGFKLMKAAY
701: EWKNSGHVIT Y

Best Arabidopsis Sequence Match ( AT5G41770.1 )
(BLAST)

001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD

Arabidopsis Description

Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.