Factsheet for AT3G13210.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G41770.1	Thale cress	nucleus	83.87	78.16
AT5G45990.2	Thale cress	nucleus	80.06	77.01
CDX94039	Canola	nucleus	70.62	72.39
CDX98687	Canola	endoplasmic reticulum, nucleus, plastid	45.36	70.12
AT3G51110.1	Thale cress	cytosol	39.73	63.2
EES19533	Sorghum	cytosol	66.67	60.83
EER93674	Sorghum	cytosol	66.67	60.66
Os05t0289400-01	Rice	nucleus	65.91	59.89
TraesCS5B01G277100.1	Wheat	cytosol, mitochondrion	51.14	59.47
TraesCS7A01G351600.1	Wheat	nucleus	64.84	59.25
TraesCS7B01G276500.1	Wheat	cytosol	64.84	59.25
TraesCS7D01G371400.1	Wheat	cytosol	64.84	59.25
Zm00001d013548_P002	Maize	mitochondrion	53.88	58.61
Zm00001d033388_P001	Maize	cytosol	66.51	56.31
TraesCS5D01G284700.1	Wheat	cytosol, mitochondrion	59.21	55.89
HORVU7Hr1G089610.1	Barley	nucleus, plastid	64.54	53.47
Os06t0523900-00	Rice	cytosol, plastid	56.32	52.93
HORVU5Hr1G075030.1	Barley	nucleus	57.69	52.79
Os10t0328700-01	Rice	mitochondrion	37.75	34.88
GSMUA_Achr5P12800_001	Banana	nucleus	5.33	17.5

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.4.5.2.6	EntrezGene:820511	ProteinID:AEE75311.1	ArrayExpress:AT3G13210	EnsemblPlantsGene:AT3G13210
RefSeq:AT3G13210	TAIR:AT3G13210	RefSeq:AT3G13210-TAIR-G	EnsemblPlants:AT3G13210.1	TAIR:AT3G13210.1	Unigene:At.53288
ncoils:Coil	UniProt:F4JC74	GO:GO:0000245	GO:GO:0000974	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006396	GO:GO:0006397	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0071010	GO:GO:0071011	GO:GO:0071012	GO:GO:0071013	GO:GO:0071014	InterPro:HAT
InterPro:IPR011990	InterPro:IPR013026	RefSeq:NP_187927.1	PFAM:PF02184	PFAM:PF05843	PFscan:PS50293
PANTHER:PTHR11246	PANTHER:PTHR11246:SF3	SMART:SM00386	SUPFAM:SSF48452	InterPro:Suf	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00001633A0	SEG:seg	:	:	:

Description

Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JC74]

Coordinates

chr3:+:4244900..4247846

Molecular Weight (calculated)

78106.1 Da

IEP (calculated)

7.192

GRAVY (calculated)

-0.751

Length

657 amino acids

Sequence
(BLAST)

001: MASGKDSDRN LGYMTRKDAE LKLPRMTQVK NKTPAPIQIT AEQILREARE RQEAEFRPPN QTITDSAELS DYRLRRRKEF EDQIRRARLN TQVWVKYADF
101: EMKNKSVNEA RNVWDRAVSL LPRVDQLWYK FIHMEEKLGN IAGARQILER WIHCSPDQQA WLCFIKFELK YNEIECARSI YERFVLCHPK VSAYIRYAKF
201: EMKHGQVELA MKVFERAKKE LADDEEAEIL FVAFAEFEEQ YKFALDQIPK GRAENLYSKF VAFEKQNGDK EGIEDAIIGK RRCQYEDEVR KNPLNYDSWF
301: DFVRLEETVG NKDRIREIYE RAVANVPPPE AQEKRYWQRY IYLWINYAFF AEMVTEDVES TRDVYRACLK LIPHSKFSFA KIWLLAAQHE IRQLNLTGAR
401: QILGNAIGKA PKDKIFKKYI EIELQLRNID RCRKLYERYL EWSPGNCYAW RKYAEFEMSL AETERTRAIF ELAISQPALD MPELLWKTYI DFEISEGELE
501: RTRALYERLL DRTKHCKVWV DFAKFEASAA EHKEDEEEED AIERKKDGIK RAREIFDRAN TYNKDSTPEL KEERAMLLED WLNMETGFGK LGDVRVVQSK
601: LPKKVKKRKL SSREDGCTEY EEYTDYLFPE ESETTSLKIL EAAHKWKKQK VKAGECV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.