Factsheet for AT5G45990.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G41770.1	Thale cress	nucleus	85.8	83.12
AT3G13210.1	Thale cress	nucleus	77.01	80.06
CDX94039	Canola	nucleus	73.5	78.32
AT3G51110.1	Thale cress	cytosol	45.1	74.58
CDX98687	Canola	endoplasmic reticulum, nucleus, plastid	44.36	71.29
EES19533	Sorghum	cytosol	70.57	66.94
EER93674	Sorghum	cytosol	70.57	66.76
Os05t0289400-01	Rice	nucleus	70.28	66.39
TraesCS7B01G276500.1	Wheat	cytosol	68.96	65.51
TraesCS7D01G371400.1	Wheat	cytosol	68.96	65.51
TraesCS7A01G351600.1	Wheat	nucleus	68.67	65.23
Zm00001d013548_P002	Maize	mitochondrion	57.39	64.9
Zm00001d033388_P001	Maize	cytosol	70.57	62.11
TraesCS5D01G284700.1	Wheat	cytosol, mitochondrion	62.52	61.35
TraesCS5B01G277100.1	Wheat	cytosol, mitochondrion	50.66	61.24
HORVU7Hr1G089610.1	Barley	nucleus, plastid	68.81	59.27
HORVU5Hr1G075030.1	Barley	nucleus	60.91	57.94
Os06t0523900-00	Rice	cytosol, plastid	56.81	55.51
Os10t0328700-01	Rice	mitochondrion	41.0	39.38
GSMUA_Achr5P12800_001	Banana	nucleus	5.71	19.5

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.4.5.2.6	EntrezGene:834639	UniProt:A0A1P8B9B1	ProteinID:AED95324.1	ProteinID:ANM68198.1
ArrayExpress:AT5G45990	EnsemblPlantsGene:AT5G45990	RefSeq:AT5G45990	TAIR:AT5G45990	RefSeq:AT5G45990-TAIR-G	EnsemblPlants:AT5G45990.2
Unigene:At.55396	ProteinID:BAB08244.1	GO:GO:0000245	GO:GO:0000974	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006396	GO:GO:0006397	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0071010	GO:GO:0071011	GO:GO:0071012	GO:GO:0071013	GO:GO:0071014	InterPro:HAT
InterPro:IPR011990	InterPro:IPR013026	RefSeq:NP_001329971.1	RefSeq:NP_199411.1	PFAM:PF02184	PFAM:PF05843
PFscan:PS50293	PANTHER:PTHR11246	PANTHER:PTHR11246:SF3	SMART:SM00386	SUPFAM:SSF48452	InterPro:Suf
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00084913A9	SEG:seg	:	:

Description

crooked neck protein, putative / cell cycle protein, putative [Source:TAIR;Acc:AT5G45990]

Coordinates

chr5:+:18651265..18654075

Molecular Weight (calculated)

82012.7 Da

IEP (calculated)

8.422

GRAVY (calculated)

-0.742

Length

683 amino acids

Sequence
(BLAST)

001: MASGDRKFGY MTGKDAEVKL PRTTRVKNKT PAPVQITAEQ ILREARERQE AEIRPPKQKI TDSTELSDYR LRRRKEFEDQ IRRARWNIQV WVKYAKWEES
101: QMDYARARSV WERALEGEYR NHTLWVKYAE FEMKNKFVNN ARNVWDRSVT LLPRVDQLWE KYIYMEEKLG NVTGARQIFE RWMNWSPDQK AWLCFIKFEL
201: RYNEIERARS IYERFVLCHP KVSAFIRYAK FEMKRGGQVK LAREVYERAV DKLANDEEAE ILFVSFAEFE ERCKEVERAR FIYKFALDHI RKGRAEELYK
301: KFVAFEKQYG DKEGIEDAIV GKKRFEYEDE VSKNPLNYDS WFDYVRLEES VGNKDRIREI YERAIANVPP AQEKRFWQRY IYLWINYALY EEIETKDVER
401: TRDVYRECLK LIPHTKFSFA KIWLLAAEYE IRQLNLTGAR QILGNAIGKA PKVKIFKKYI EMELKLVNID RCRKLYERFL EWSPENCYAW RNYAEFEISL
501: AETERARAIF ELAISQPALD MPELLWKTYI DFEISEGEFE KTRALYERLL DRTKHCKVWI SFAKFEASAS EHKEDGIKSA RVIFDRANTY YKDTTPELEE
601: ERATLLEDWL NMETGFGELG DVSVVQSKLP KKLKKRKMTS REDGSTEYEE YFDYLFPEES GTTNLKILEA AYKWKKLKGE ECV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.