Factsheet for Bra031930.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31331	Canola	cytosol, nucleus, plastid	90.7	93.8
Bra028504.1-P	Field mustard	nucleus	71.66	67.71
Bra025462.1-P	Field mustard	nucleus	71.06	67.14
Bra038885.1-P	Field mustard	nucleus	30.58	64.15
AT3G51110.1	Thale cress	cytosol	37.78	61.02
EES19533	Sorghum	cytosol	64.92	60.14
EER93674	Sorghum	cytosol	64.92	59.97
Os05t0289400-01	Rice	nucleus	63.72	58.78
TraesCS7A01G351600.1	Wheat	nucleus	63.12	58.55
TraesCS7B01G276500.1	Wheat	cytosol	62.97	58.41
TraesCS7D01G371400.1	Wheat	cytosol	62.97	58.41
Zm00001d013548_P002	Maize	mitochondrion	51.87	57.28
Zm00001d033388_P001	Maize	cytosol	64.92	55.8
TraesCS5B01G277100.1	Wheat	cytosol, mitochondrion	47.08	55.58
TraesCS5D01G284700.1	Wheat	cytosol, mitochondrion	57.42	55.03
HORVU5Hr1G075030.1	Barley	nucleus	56.97	52.92
HORVU7Hr1G089610.1	Barley	nucleus, plastid	62.82	52.84
Os06t0523900-00	Rice	cytosol, plastid	53.37	50.93
Os10t0328700-01	Rice	mitochondrion	40.18	37.69
Bra023285.1-P	Field mustard	mitochondrion	9.15	37.2
GSMUA_Achr5P12800_001	Banana	nucleus	5.1	17.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.4.5.2.6	EnsemblPlantsGene:Bra031930	EnsemblPlants:Bra031930.1	EnsemblPlants:Bra031930.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006396	GO:GO:0006397	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
InterPro:HAT	InterPro:IPR011990	InterPro:IPR013026	UniProt:M4ET00	PFAM:PF05843	PFscan:PS50293
PANTHER:PTHR11246	PANTHER:PTHR11246:SF3	SMART:SM00386	SUPFAM:SSF48452	InterPro:Suf	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002546711	SEG:seg	:	:	:

Description

AT5G41770 (E=6e-264) | crooked neck protein, putative / cell cycle protein, putative

Coordinates

chrA02:-:27054619..27056687

Molecular Weight (calculated)

79570.6 Da

IEP (calculated)

5.938

GRAVY (calculated)

-0.675

Length

667 amino acids

Sequence
(BLAST)

001: MASFAKDITQ VKLPRPTRVK NKTPAPLQIT AEQLLREARE RQESQILPPH QNITDPTELS DYRLRLRKDF EDRIRRPGPS TQVWLNYARW EESQKDYARA
101: RSVWERALQA DYRNHAVWVK YAEFEMRNMF VNSARNVWDR AVALLPRVDQ LWYKYIHMEE MLGNITGARE IFERWMKWLP DQQGWLSFIN FDSSSFVIKK
201: PHVREMSTRG EVARARDVYE RAVNNLGDDE ELFVAFAEFE ERCNEVERAR VIYKFGLDRV GRGEELYKKF VAFEKQHGDK EGIDDVIVGR RRFEYEEQVR
301: KSPLNYDAWF DYVRLEEEVA SSVGDKERVR EVYERAVANV PPANEKCYWR RYIYLWINYA LYEEIEAEDV DRARQVYREC LKLVPHARFS FAKIWLLAAQ
401: FEIRQLNLKG CRKILGNGIG KATNKDKIFK KYIEIELELG EIDRCRRLYE KYLEWSPDNC YVWCKYAEFE ISLEETERAR GIFELAVSQT TLDLPEVLWK
501: GYIDFEMSQG DVERTRALYE RLLERTKHYK VWVSFAKFEA GEQDEDEEED GIERKQECIR RTRAVFDRAY VYYKEVIPEM KEERSTLLEE WLNMEMSFGM
601: LGDVSIVKSK LPKKLKKRKA ITGEDGSVEY VEYTDYLFPE ELEASNLKIL EAAIRWKKQK VGAFCNV

Best Arabidopsis Sequence Match ( AT5G41770.1 )
(BLAST)

001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD

Arabidopsis Description

Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.