Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35016 | Canola | nucleus | 99.4 | 97.36 |
| CDY49876 | Canola | nucleus | 96.85 | 96.85 |
| CDY27682 | Canola | nucleus | 96.7 | 96.7 |
| Bra028504.1-P | Field mustard | nucleus | 99.25 | 93.77 |
| AT5G41770.1 | Thale cress | nucleus | 92.2 | 87.23 |
| CDY49874 | Canola | mitochondrion | 17.54 | 81.82 |
| CDX89268 | Canola | cytosol | 15.29 | 80.95 |
| CDY38549 | Canola | extracellular | 9.6 | 79.01 |
| CDX94039 | Canola | nucleus | 73.61 | 76.6 |
| CDY51192 | Canola | cytosol | 16.49 | 75.86 |
| CDY16320 | Canola | cytosol, mitochondrion | 21.74 | 74.74 |
| CDX98687 | Canola | endoplasmic reticulum, nucleus, plastid | 46.93 | 73.65 |
| CDY63724 | Canola | plastid | 66.87 | 68.3 |
| EES19533 | Sorghum | cytosol | 71.81 | 66.53 |
| EER93674 | Sorghum | cytosol | 71.66 | 66.2 |
| CDY31331 | Canola | cytosol, nucleus, plastid | 63.57 | 65.74 |
| Os05t0289400-01 | Rice | nucleus | 71.21 | 65.7 |
| TraesCS7D01G371400.1 | Wheat | cytosol | 70.02 | 64.95 |
| TraesCS7B01G276500.1 | Wheat | cytosol | 70.02 | 64.95 |
| TraesCS7A01G351600.1 | Wheat | nucleus | 70.02 | 64.95 |
| TraesCS5B01G277100.1 | Wheat | cytosol, mitochondrion | 53.82 | 63.54 |
| Zm00001d013548_P002 | Maize | mitochondrion | 57.27 | 63.24 |
| CDY16319 | Canola | nucleus | 8.25 | 63.22 |
| Zm00001d033388_P001 | Maize | cytosol | 71.66 | 61.6 |
| TraesCS5D01G284700.1 | Wheat | cytosol, mitochondrion | 62.37 | 59.77 |
| Os06t0523900-00 | Rice | cytosol, plastid | 61.47 | 58.66 |
| HORVU7Hr1G089610.1 | Barley | nucleus, plastid | 69.72 | 58.64 |
| HORVU5Hr1G075030.1 | Barley | nucleus | 60.57 | 56.27 |
| CDY14715 | Canola | cytosol | 16.94 | 53.55 |
| CDX93820 | Canola | cytosol | 11.84 | 42.25 |
| Os10t0328700-01 | Rice | mitochondrion | 40.18 | 37.69 |
| GSMUA_Achr5P12800_001 | Banana | nucleus | 6.15 | 20.5 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.4.5.2.6 | GO:A0A078BSB4 | EnsemblPlants:CDX67505 | ProteinID:CDX67505 | ProteinID:CDX67505.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00098625001 | InterPro:HAT | InterPro:IPR011990 |
| PFAM:PF02184 | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF3 | SMART:SM00386 | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI0004EDB132 | SEG:seg | : | : | : | : |
Description
BnaA07g15450D
Coordinates
chrLK031787:+:667132..670409
Molecular Weight (calculated)
80007.8 Da
IEP (calculated)
5.682
GRAVY (calculated)
-0.818
Length
667 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGKDSDRT LGYMTRKDTE VKLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK QKITDSTELS DYRLRRRKEF EDQIRRARWN IQVWMKNHTL
101: WLKYAENVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMQWS PDQQGWLSFV KFELRYNEIE RARSIYERFV LCHPKVSAFI RFAKFEMKGG
201: EVARARHVYE RATEKLAEDE EAETLFVAFA EFEERCKEPE RARFIYKFAL DHIPKGRAED LYKKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKNPLN
301: YDSWFDYVRL EETVGNKDRI REIYERAIAN IPPAEEKRYW QRYIYLWINY ALYEEIETED VERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLA
401: GARQILGNAI GKAPKDKIFK KYIEIELQLG NIDRCRKLYE RYLEWSPENC YAWSKYAELE RSLAETERAR AIFELAISQP ALDMPELLWK AYIDFEIAEG
501: ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAEQEEDEE EEDQEETDAI ERKKECIRLA RAIFERANSY YKDSAPELKE ERATLLEDWL NMETNFGNLG
601: DVSVVQSKLP KKLKKRKPIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKLA TSEEEYD
101: WLKYAENVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMQWS PDQQGWLSFV KFELRYNEIE RARSIYERFV LCHPKVSAFI RFAKFEMKGG
201: EVARARHVYE RATEKLAEDE EAETLFVAFA EFEERCKEPE RARFIYKFAL DHIPKGRAED LYKKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKNPLN
301: YDSWFDYVRL EETVGNKDRI REIYERAIAN IPPAEEKRYW QRYIYLWINY ALYEEIETED VERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLA
401: GARQILGNAI GKAPKDKIFK KYIEIELQLG NIDRCRKLYE RYLEWSPENC YAWSKYAELE RSLAETERAR AIFELAISQP ALDMPELLWK AYIDFEIAEG
501: ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAEQEEDEE EEDQEETDAI ERKKECIRLA RAIFERANSY YKDSAPELKE ERATLLEDWL NMETNFGNLG
601: DVSVVQSKLP KKLKKRKPIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKLA TSEEEYD
001: MASGGKDSDR TLGYMTRKDT EVKLPRPTRV KNKTPAPIQI TAEQILREAR ERQEAEIRPP KQKITDSTEL SDYRLRRRKE FEDQIRRARW NIQVWVKYAQ
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
101: WEESQKDYAR ARSVWERAIE GDYRNHTLWL KYAEFEMKNK FVNSARNVWD RAVTLLPRVD QLWYKYIHME EILGNIAGAR QIFERWMDWS PDQQGWLSFI
201: KFELRYNEIE RARTIYERFV LCHPKVSAYI RYAKFEMKGG EVARCRSVYE RATEKLADDE EAEILFVAFA EFEERCKEVE RARFIYKFAL DHIPKGRAED
301: LYRKFVAFEK QYGDKEGIED AIVGKRRFQY EDEVRKSPSN YDSWFDYVRL EESVGNKDRI REIYERAIAN VPPAEEKRYW QRYIYLWINY ALFEEIETED
401: IERTRDVYRE CLKLIPHSKF SFAKIWLLAA QFEIRQLNLT GARQILGNAI GKAPKDKIFK KYIEIELQLG NMDRCRKLYE RYLEWSPENC YAWSKYAELE
501: RSLVETERAR AIFELAISQP ALDMPELLWK AYIDFEISEG ELERTRALYE RLLDRTKHYK VWVSFAKFEA SAAELEEDEN EDEDQEEDVI EHKKDCIKRA
601: RAIFDRANTY YKDSTPELKE ERATLLEDWL NMESSFGNLG DVSIVQSKLP KKLKKRKAIT REDGSTEYEE YIDYLYPEES QTTNLKILEA AYKWKKQKVA
701: ASEDD
Arabidopsis Description
Crooked neck protein, putative / cell cycle protein [Source:UniProtKB/TrEMBL;Acc:F4JZX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.