Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 11.43 | 68.29 |
| HORVU3Hr1G039480.2 | Barley | cytosol, nucleus | 15.92 | 63.93 |
| TraesCS2A01G009400.2 | Wheat | nucleus | 63.67 | 63.67 |
| Os04t0118900-01 | Rice | nucleus | 63.27 | 63.27 |
| EES11769 | Sorghum | nucleus | 59.59 | 61.34 |
| TraesCS2D01G010300.1 | Wheat | nucleus | 62.04 | 60.08 |
| VIT_15s0046g00050.t01 | Wine grape | nucleus | 9.39 | 58.97 |
| GSMUA_Achr1P03880_001 | Banana | nucleus | 55.51 | 56.67 |
| GSMUA_Achr11P... | Banana | extracellular, plastid | 62.86 | 56.41 |
| GSMUA_Achr5P10480_001 | Banana | nucleus | 55.51 | 56.2 |
| Zm00001d025063_P002 | Maize | cytosol | 60.0 | 54.85 |
| GSMUA_Achr3P12360_001 | Banana | nucleus | 46.12 | 54.33 |
| Zm00001d004477_P005 | Maize | cytosol | 58.78 | 47.84 |
| GSMUA_Achr1P16190_001 | Banana | nucleus | 32.65 | 45.98 |
Protein Annotations
| MapMan:16.4.6.3 | Gene3D:3.30.70.330 | GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G03990_001 | EnsemblPlants:GSMUA_Achr1P03990_001 |
| EnsemblPlants:GSMUA_Achr1T03990_001 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M0RWV7 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFscan:PS50102 | PANTHER:PTHR44257 | PANTHER:PTHR44257:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | InterPro:RS31 |
| InterPro:RSP31/31A/40/41 | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000296DC63 | SEG:seg | : |
Description
Arginine/serine-rich-splicing factor RSP31 [Source:GMGC_GENE;Acc:GSMUA_Achr1G03990_001]
Coordinates
chr1:-:3313405..3317726
Molecular Weight (calculated)
28620.0 Da
IEP (calculated)
9.768
GRAVY (calculated)
-1.189
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPVFVGNLE SDTRHSDLDR LFSKYGRVDR IDMKSGYAFV YFEDERDAED AIHRLDGIPF GYSRRRLSVE WSKQGGRGPR DRDGSRPAAN TRPTRTLFVI
101: NFDPIHTRVR DIERHFESYG KILNVRIRRN FAFVQFETQE EATKALECTN LSKILDRMVT VEYAFRDDDD GDHGDVRDSR GGYGKQDDRA YGRSDSPGYR
201: RDRPSPDYGR ARSPVYDRYN GPSHDRSPEY GRYRSRSPPG RRSRT
101: NFDPIHTRVR DIERHFESYG KILNVRIRRN FAFVQFETQE EATKALECTN LSKILDRMVT VEYAFRDDDD GDHGDVRDSR GGYGKQDDRA YGRSDSPGYR
201: RDRPSPDYGR ARSPVYDRYN GPSHDRSPEY GRYRSRSPPG RRSRT
001: MRPVFVGNFE YETRQSDLER LFDKYGRVDR VDMKSGYAFV YFEDERDAED AIRKLDNFPF GYEKRRLSVE WAKGERGRPR GDAKAPSNLK PTKTLFVINF
101: DPIRTKEHDI EKHFEPYGKV TNVRIRRNFS FVQFETQEDA TKALEATQRS KILDRVVSVE YALKDDDERD DRNGGRSPRR SLSPVYRRRP SPDYGRRPSP
201: GQGRRPSPDY GRARSPEYDR YKGPAAYERR RSPDYGRRSS DYGRQRSPGY DRYRSRSPVP RGRP
101: DPIRTKEHDI EKHFEPYGKV TNVRIRRNFS FVQFETQEDA TKALEATQRS KILDRVVSVE YALKDDDERD DRNGGRSPRR SLSPVYRRRP SPDYGRRPSP
201: GQGRRPSPDY GRARSPEYDR YKGPAAYERR RSPDYGRRSS DYGRQRSPGY DRYRSRSPVP RGRP
Arabidopsis Description
RS31RSP31 [Source:UniProtKB/TrEMBL;Acc:A0A178VG60]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.