Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P10150_001 | Banana | mitochondrion | 56.16 | 59.85 |
| GSMUA_Achr7P05310_001 | Banana | mitochondrion | 52.74 | 50.66 |
| GSMUA_AchrUn_... | Banana | plastid | 51.37 | 44.64 |
| TraesCS7B01G413400.1 | Wheat | mitochondrion, plastid | 32.19 | 33.33 |
| EES05389 | Sorghum | plastid | 32.19 | 30.72 |
| Os06t0650900-02 | Rice | plastid | 29.45 | 30.28 |
| Zm00001d046813_P003 | Maize | plastid | 31.51 | 29.87 |
| Zm00001d046812_P001 | Maize | plastid | 31.51 | 29.87 |
| TraesCS7D01G494800.1 | Wheat | plastid | 26.71 | 29.55 |
| EER90130 | Sorghum | plastid | 33.56 | 28.82 |
| TraesCS7B01G415000.1 | Wheat | plastid | 27.4 | 28.37 |
| TraesCS7D01G494900.1 | Wheat | plastid | 28.08 | 27.89 |
| TraesCSU01G098500.1 | Wheat | plastid | 28.77 | 27.81 |
| TraesCS7D01G495200.1 | Wheat | plastid | 28.08 | 26.8 |
| TraesCS7A01G506000.1 | Wheat | plastid | 28.77 | 26.75 |
| HORVU7Hr1G113530.1 | Barley | plastid | 28.77 | 26.42 |
| HORVU7Hr1G113460.1 | Barley | plastid | 28.77 | 26.42 |
| TraesCS7D01G494000.1 | Wheat | plastid | 28.08 | 26.11 |
| TraesCS7A01G506100.1 | Wheat | plastid | 27.4 | 25.97 |
| TraesCS7A01G506700.1 | Wheat | plastid | 29.45 | 25.0 |
| TraesCS7D01G494100.1 | Wheat | plastid | 16.44 | 24.24 |
| TraesCS7B01G413500.1 | Wheat | mitochondrion, plastid | 15.75 | 22.77 |
| TraesCS7B01G414800.1 | Wheat | nucleus | 30.82 | 15.2 |
| TraesCS7D01G495500.1 | Wheat | plastid | 28.08 | 14.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P05050_001 | EnsemblPlants:GSMUA_Achr2T05050_001 | EnsemblPlantsGene:GSMUA_Achr2G05050_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF518 | PFAM:PF00226 | PFscan:PS50076 |
| PRINTS:PR00625 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0002966A9C | UniProt:M0S596 | MapMan:23.1.2.5 |
Description
Whole genome shotgun sequence of line PN40024, scaffold_18.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G05050_001]
Coordinates
chr2:+:10262085..10262945
Molecular Weight (calculated)
16472.3 Da
IEP (calculated)
6.931
GRAVY (calculated)
-0.761
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MASMGAPSGV GFCAGKRPVL KTKRSGGNVR CAATKNLMEQ YRTLKIQPGA SEQEVKKAFR RLALQYHPDV CKGGNSSVEF HQINEAYHMV MNSFRRSKEQ
101: DWSDDVGADE LTTEMYDPNR DLWEEWMGWE GASTTGDYSS HINPYI
101: DWSDDVGADE LTTEMYDPNR DLWEEWMGWE GASTTGDYSS HINPYI
001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
Arabidopsis Description
ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.