Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G494800.1 | Wheat | plastid | 65.7 | 85.61 |
| TraesCS7B01G413400.1 | Wheat | mitochondrion, plastid | 68.02 | 82.98 |
| TraesCS7A01G506100.1 | Wheat | plastid | 72.09 | 80.52 |
| TraesCSU01G098500.1 | Wheat | plastid | 67.44 | 76.82 |
| TraesCS7A01G506000.1 | Wheat | plastid | 65.12 | 71.34 |
| Os06t0650900-02 | Rice | plastid | 47.09 | 57.04 |
| Zm00001d046813_P003 | Maize | plastid | 47.09 | 52.6 |
| Zm00001d046812_P001 | Maize | plastid | 47.09 | 52.6 |
| EER90130 | Sorghum | plastid | 47.09 | 47.65 |
| EES05389 | Sorghum | plastid | 38.37 | 43.14 |
| VIT_09s0018g00620.t01 | Wine grape | plastid | 27.33 | 30.92 |
| GSMUA_Achr2P05050_001 | Banana | plastid | 25.0 | 29.45 |
| KRH47322 | Soybean | plastid | 23.84 | 26.28 |
| PGSC0003DMT400073306 | Potato | cytosol | 24.42 | 25.93 |
| Solyc06g068500.2.1 | Tomato | plastid | 24.42 | 25.93 |
| CDY22291 | Canola | plastid | 22.09 | 25.17 |
| PGSC0003DMT400036852 | Potato | plastid | 23.26 | 24.69 |
| Bra008430.1-P | Field mustard | plastid | 21.51 | 24.5 |
| KRH44579 | Soybean | plastid | 19.77 | 23.94 |
| Solyc03g117590.2.1 | Tomato | plastid | 22.09 | 23.6 |
| Bra035143.1-P | Field mustard | plastid | 22.09 | 23.46 |
| CDX88567 | Canola | plastid | 21.51 | 22.84 |
| CDX87353 | Canola | plastid | 21.51 | 22.84 |
| CDX79343 | Canola | plastid | 20.35 | 21.6 |
| CDX67975 | Canola | plastid | 20.35 | 21.6 |
| Bra003592.1-P | Field mustard | plastid | 20.35 | 21.6 |
| AT1G80920.1 | Thale cress | plastid | 20.35 | 21.47 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G506700.1 | EnsemblPlantsGene:TraesCS7A01G506700 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR24074 | PANTHER:PTHR24074:SF12 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7A:-:694022069..694022587
Molecular Weight (calculated)
19231.5 Da
IEP (calculated)
7.960
GRAVY (calculated)
-0.619
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGGGVVLN LRVPSASAAP ARRCGTASSS SVRCGSARGA APARPAGGGL EEDHYRTLRL APGATRGEVK RAFHRHALQY HPDVVRRDSC DNAQENSIDF
101: ERINAAYQRV MSNMREAEVR LEYWRRRYGL ADEDLDRYRR YLKDDDEDDW FSDFGNLLPC RAVTEALAII TL
101: ERINAAYQRV MSNMREAEVR LEYWRRRYGL ADEDLDRYRR YLKDDDEDDW FSDFGNLLPC RAVTEALAII TL
001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
Arabidopsis Description
ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.