Factsheet for Solyc03g117590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036852	Potato	plastid	83.23	82.72
Solyc06g068500.2.1	Tomato	plastid	65.22	64.81
KRH44579	Soybean	plastid	54.66	61.97
KRH47322	Soybean	plastid	59.63	61.54
GSMUA_Achr1P10150_001	Banana	mitochondrion	48.45	56.93
VIT_09s0018g00620.t01	Wine grape	plastid	52.8	55.92
CDY22291	Canola	plastid	50.93	54.3
AT1G80920.1	Thale cress	plastid	54.66	53.99
CDX79343	Canola	plastid	53.42	53.09
Bra008430.1-P	Field mustard	plastid	49.69	52.98
Bra003592.1-P	Field mustard	plastid	52.17	51.85
CDX67975	Canola	plastid	52.17	51.85
CDX87353	Canola	plastid	51.55	51.23
Bra035143.1-P	Field mustard	plastid	50.93	50.62
CDX88567	Canola	plastid	50.93	50.62
GSMUA_Achr7P05310_001	Banana	mitochondrion	46.58	49.34
GSMUA_AchrUn_...	Banana	plastid	47.2	45.24
TraesCS7B01G413400.1	Wheat	mitochondrion, plastid	25.47	29.08
TraesCS7D01G494800.1	Wheat	plastid	23.6	28.79
TraesCSU01G098500.1	Wheat	plastid	26.71	28.48
TraesCS7B01G415000.1	Wheat	plastid	24.84	28.37
Zm00001d046813_P003	Maize	plastid	26.71	27.92
Zm00001d046812_P001	Maize	plastid	26.71	27.92
Os06t0650900-02	Rice	plastid	24.22	27.46
EES05389	Sorghum	plastid	26.09	27.45
TraesCS7D01G494900.1	Wheat	plastid	24.84	27.21
TraesCS7D01G495200.1	Wheat	plastid	25.47	26.8
TraesCS7A01G506000.1	Wheat	plastid	26.09	26.75
TraesCS7D01G494100.1	Wheat	plastid	16.15	26.26
TraesCS7D01G494000.1	Wheat	plastid	25.47	26.11
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	16.15	25.74
HORVU7Hr1G113460.1	Barley	plastid	24.84	25.16
HORVU7Hr1G113530.1	Barley	plastid	24.84	25.16
EER90130	Sorghum	plastid	26.09	24.71
TraesCS7A01G506700.1	Wheat	plastid	23.6	22.09
TraesCS7A01G506100.1	Wheat	plastid	21.12	22.08
TraesCS7B01G414800.1	Wheat	nucleus	26.71	14.53
TraesCS7D01G495500.1	Wheat	plastid	24.84	13.94

Protein Annotations

EMBL:GQ925907	EnsemblPlants:Solyc03g117590.2.1	EnsemblPlantsGene:Solyc03g117590.2	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0001E5E81C	UniProt:E2DDU6
MapMan:23.1.2.5	:	:	:	:	:

Description

Heat shock protein binding protein [Source:UniProtKB/TrEMBL;Acc:E2DDU6]

Coordinates

chr3:-:66702243..66703491

Molecular Weight (calculated)

18070.2 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.640

Length

161 amino acids

Sequence
(BLAST)

001: MATMGMTGSI GGYGAASASL FRLRNSAKKK TRNGKNGFRV SCVCSSSAVA DPYKTLKIQP GASESEVRKA FRQLALKYHP DVCRGNNCGV QFHQINEAYD
101: VVMSNLRGET RAELEMIEEY DDSNDESMRG MHEPDWDLWE EWMGWEGAGI RDYTSHVNPY I

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.