Factsheet for Bra035143.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87353	Canola	plastid	98.15	98.15
Bra003592.1-P	Field mustard	plastid	93.21	93.21
AT1G80920.1	Thale cress	plastid	93.21	92.64
Bra008430.1-P	Field mustard	plastid	77.16	82.78
KRH47322	Soybean	plastid	51.85	53.85
KRH44579	Soybean	plastid	46.3	52.82
PGSC0003DMT400073306	Potato	cytosol	52.47	52.47
Solyc03g117590.2.1	Tomato	plastid	50.62	50.93
PGSC0003DMT400036852	Potato	plastid	50.62	50.62
Solyc06g068500.2.1	Tomato	plastid	50.0	50.0
GSMUA_Achr1P10150_001	Banana	mitochondrion	41.98	49.63
VIT_09s0018g00620.t01	Wine grape	plastid	44.44	47.37
GSMUA_AchrUn_...	Banana	plastid	46.91	45.24
GSMUA_Achr7P05310_001	Banana	mitochondrion	41.36	44.08
Os06t0650900-02	Rice	plastid	28.4	32.39
EES05389	Sorghum	plastid	29.63	31.37
TraesCS7B01G415000.1	Wheat	plastid	25.93	29.79
TraesCS7D01G494800.1	Wheat	plastid	23.46	28.79
EER90130	Sorghum	plastid	29.63	28.24
Zm00001d046813_P003	Maize	plastid	26.54	27.92
Zm00001d046812_P001	Maize	plastid	26.54	27.92
TraesCS7B01G413400.1	Wheat	mitochondrion, plastid	24.07	27.66
TraesCS7D01G494000.1	Wheat	plastid	25.93	26.75
TraesCSU01G098500.1	Wheat	plastid	24.69	26.49
TraesCS7D01G494100.1	Wheat	plastid	16.05	26.26
TraesCS7D01G495200.1	Wheat	plastid	24.69	26.14
TraesCS7A01G506000.1	Wheat	plastid	25.31	26.11
TraesCS7D01G494900.1	Wheat	plastid	23.46	25.85
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	16.05	25.74
HORVU7Hr1G113460.1	Barley	plastid	24.07	24.53
HORVU7Hr1G113530.1	Barley	plastid	24.07	24.53
TraesCS7A01G506100.1	Wheat	plastid	21.6	22.73
TraesCS7A01G506700.1	Wheat	plastid	23.46	22.09
Bra016087.1-P	Field mustard	nucleus	26.54	21.39
TraesCS7D01G495500.1	Wheat	plastid	25.93	14.63
TraesCS7B01G414800.1	Wheat	nucleus	25.93	14.19

Protein Annotations

EnsemblPlants:Bra035143.1	EnsemblPlants:Bra035143.1-P	EnsemblPlantsGene:Bra035143	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002541DC3	UniProt:M4F246
MapMan:23.1.2.5	:	:	:	:	:

Description

AT1G80920 (E=1e-075) J8 | J8; heat shock protein binding / unfolded protein binding

Coordinates

chrA07:+:22351468..22352154

Molecular Weight (calculated)

18238.3 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.700

Length

162 amino acids

Sequence
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSASSSLRFK NSRRKNTKML NRKGVICSSS SVMDPYKTLR IRPDSSEYEV KQAFRQLAKK YHPDVCRGSN CGVQFQTINE
101: AYDIVLKQIK NQMEGAEEFQ PFDVYDEGFN GMNDPDCDTW EEWMGWEGAG TRDYSSHVNP YA

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.