Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G415000.1 | Wheat | plastid | 82.99 | 86.52 |
| TraesCS7D01G494800.1 | Wheat | plastid | 64.63 | 71.97 |
| TraesCS7D01G494100.1 | Wheat | plastid | 48.3 | 71.72 |
| TraesCS7D01G494000.1 | Wheat | plastid | 75.51 | 70.7 |
| TraesCS7D01G495200.1 | Wheat | plastid | 72.79 | 69.93 |
| Os06t0650900-02 | Rice | plastid | 53.74 | 55.63 |
| Zm00001d046813_P003 | Maize | plastid | 54.42 | 51.95 |
| Zm00001d046812_P001 | Maize | plastid | 54.42 | 51.95 |
| EER90130 | Sorghum | plastid | 55.78 | 48.24 |
| EES05389 | Sorghum | plastid | 48.3 | 46.41 |
| TraesCS7D01G495500.1 | Wheat | plastid | 72.79 | 37.28 |
| VIT_09s0018g00620.t01 | Wine grape | plastid | 32.65 | 31.58 |
| KRH47322 | Soybean | plastid | 29.93 | 28.21 |
| GSMUA_Achr2P05050_001 | Banana | plastid | 27.89 | 28.08 |
| CDY22291 | Canola | plastid | 27.21 | 26.49 |
| Solyc06g068500.2.1 | Tomato | plastid | 28.57 | 25.93 |
| Bra008430.1-P | Field mustard | plastid | 26.53 | 25.83 |
| PGSC0003DMT400073306 | Potato | cytosol | 27.89 | 25.31 |
| PGSC0003DMT400036852 | Potato | plastid | 27.89 | 25.31 |
| Solyc03g117590.2.1 | Tomato | plastid | 27.21 | 24.84 |
| KRH44579 | Soybean | plastid | 23.81 | 24.65 |
| CDX79343 | Canola | plastid | 25.85 | 23.46 |
| CDX67975 | Canola | plastid | 25.85 | 23.46 |
| Bra035143.1-P | Field mustard | plastid | 25.85 | 23.46 |
| Bra003592.1-P | Field mustard | plastid | 25.85 | 23.46 |
| CDX87353 | Canola | plastid | 25.17 | 22.84 |
| CDX88567 | Canola | plastid | 25.17 | 22.84 |
| AT1G80920.1 | Thale cress | plastid | 25.17 | 22.7 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G494900.1 | EnsemblPlantsGene:TraesCS7D01G494900 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR24074 | PANTHER:PTHR24074:SF12 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7D:+:602197052..602197495
Molecular Weight (calculated)
16524.2 Da
IEP (calculated)
6.117
GRAVY (calculated)
-0.676
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAGGVALS LRVPSSSASP AVRGRRQAAV RCGATRARPA VPGGGLEEDH YRTLRLTPGA TTGDVKRAFH RLALQYHPDV VRDGHQDDDG VDFERINAAY
101: QRVMSNMREA EATLEYWRRR YGLADEDLDR YRLYLNAEDD EDWFSDL
101: QRVMSNMREA EATLEYWRRR YGLADEDLDR YRLYLNAEDD EDWFSDL
001: MIRNFRFKAP TNHPGSTIQT DSRRLIQFPT RCCLSPDLSH YTVLGLTPLA SQTEVKRAFK RLALKYHPDV HKGQDKDFKE IKSAYECLMQ KFKKEEEEME
101: ITEMGEIDEW EEWMGFEGGI PSGISY
101: ITEMGEIDEW EEWMGFEGGI PSGISY
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IBN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.