Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G494900.1 | Wheat | plastid | 86.52 | 82.99 |
| TraesCS7B01G413500.1 | Wheat | mitochondrion, plastid | 53.19 | 74.26 |
| TraesCSU01G098500.1 | Wheat | plastid | 79.43 | 74.17 |
| TraesCS7B01G413400.1 | Wheat | mitochondrion, plastid | 67.38 | 67.38 |
| Os06t0650900-02 | Rice | plastid | 56.03 | 55.63 |
| Zm00001d046813_P003 | Maize | plastid | 54.61 | 50.0 |
| Zm00001d046812_P001 | Maize | plastid | 54.61 | 50.0 |
| EER90130 | Sorghum | plastid | 56.03 | 46.47 |
| EES05389 | Sorghum | plastid | 49.65 | 45.75 |
| TraesCS7B01G414800.1 | Wheat | nucleus | 80.85 | 38.51 |
| VIT_09s0018g00620.t01 | Wine grape | plastid | 34.04 | 31.58 |
| CDY22291 | Canola | plastid | 31.21 | 29.14 |
| KRH47322 | Soybean | plastid | 31.91 | 28.85 |
| Bra008430.1-P | Field mustard | plastid | 30.5 | 28.48 |
| GSMUA_Achr2P05050_001 | Banana | plastid | 28.37 | 27.4 |
| CDX67975 | Canola | plastid | 31.21 | 27.16 |
| Bra003592.1-P | Field mustard | plastid | 31.21 | 27.16 |
| CDX87353 | Canola | plastid | 30.5 | 26.54 |
| CDX79343 | Canola | plastid | 30.5 | 26.54 |
| AT1G80920.1 | Thale cress | plastid | 30.5 | 26.38 |
| Bra035143.1-P | Field mustard | plastid | 29.79 | 25.93 |
| PGSC0003DMT400036852 | Potato | plastid | 29.08 | 25.31 |
| PGSC0003DMT400073306 | Potato | cytosol | 29.08 | 25.31 |
| CDX88567 | Canola | plastid | 29.08 | 25.31 |
| Solyc03g117590.2.1 | Tomato | plastid | 28.37 | 24.84 |
| Solyc06g068500.2.1 | Tomato | plastid | 28.37 | 24.69 |
| KRH44579 | Soybean | plastid | 24.82 | 24.65 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G415000.1 | EnsemblPlantsGene:TraesCS7B01G415000 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR24074 | PANTHER:PTHR24074:SF12 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:23.1.2.5 | : | : |
Description
No Description!
Coordinates
chr7B:-:682885959..682886384
Molecular Weight (calculated)
16231.8 Da
IEP (calculated)
7.668
GRAVY (calculated)
-0.899
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSLRVPSS SASPAVGRRQ RAAVRCGATR ARPAVPGGGL EEDHYRTLRL APGASRGEVK RAFRRLALQY HPDVVRDGHQ DDDGVDFQRI NAAYQRVMSN
101: IRETEARLEY WRRRYGLADE DLDRYRHYLN DEDEDDWFAD L
101: IRETEARLEY WRRRYGLADE DLDRYRHYLN DEDEDDWFAD L
001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
Arabidopsis Description
ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.