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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22291 Canola plastid 96.69 96.69
Bra003592.1-P Field mustard plastid 86.09 80.25
AT1G80920.1 Thale cress plastid 83.44 77.3
Bra035143.1-P Field mustard plastid 82.78 77.16
PGSC0003DMT400036852 Potato plastid 53.64 50.0
Solyc03g117590.2.1 Tomato plastid 52.98 49.69
KRH47322 Soybean plastid 50.99 49.36
GSMUA_Achr1P10150_001 Banana mitochondrion 43.71 48.18
PGSC0003DMT400073306 Potato cytosol 50.99 47.53
Solyc06g068500.2.1 Tomato plastid 50.33 46.91
VIT_09s0018g00620.t01 Wine grape plastid 47.02 46.71
KRH44579 Soybean plastid 43.71 46.48
GSMUA_AchrUn_... Banana plastid 46.36 41.67
GSMUA_Achr7P05310_001 Banana mitochondrion 40.4 40.13
TraesCS7B01G415000.1 Wheat plastid 28.48 30.5
EES05389 Sorghum plastid 29.8 29.41
TraesCS7D01G495200.1 Wheat plastid 29.14 28.76
TraesCSU01G098500.1 Wheat plastid 28.48 28.48
TraesCS7D01G494800.1 Wheat plastid 23.84 27.27
TraesCS7B01G413400.1 Wheat mitochondrion, plastid 25.17 26.95
Os06t0650900-02 Rice plastid 25.17 26.76
TraesCS7D01G494000.1 Wheat plastid 27.81 26.75
TraesCS7D01G494900.1 Wheat plastid 25.83 26.53
TraesCS7A01G506000.1 Wheat plastid 27.15 26.11
Zm00001d046813_P003 Maize plastid 25.83 25.32
Zm00001d046812_P001 Maize plastid 25.83 25.32
TraesCS7D01G494100.1 Wheat plastid 16.56 25.25
TraesCS7B01G413500.1 Wheat mitochondrion, plastid 16.56 24.75
EER90130 Sorghum plastid 27.81 24.71
HORVU7Hr1G113460.1 Barley plastid 25.83 24.53
HORVU7Hr1G113530.1 Barley plastid 25.83 24.53
TraesCS7A01G506100.1 Wheat plastid 23.84 23.38
TraesCS7A01G506700.1 Wheat plastid 24.5 21.51
Bra016087.1-P Field mustard nucleus 26.49 19.9
TraesCS7D01G495500.1 Wheat plastid 29.14 15.33
TraesCS7B01G414800.1 Wheat nucleus 26.49 13.51
Protein Annotations
EnsemblPlants:Bra008430.1EnsemblPlants:Bra008430.1-PEnsemblPlantsGene:Bra008430Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfPANTHER:PTHR24074PANTHER:PTHR24074:SF12PFAM:PF00226PFscan:PS50076
PRINTS:PR00625SEG:segSMART:SM00271SUPFAM:SSF46565UniParc:UPI00025468AAUniProt:M4CW33
MapMan:23.1.2.5:::::
Description
AT1G80920 (E=1e-068) J8 | J8; heat shock protein binding / unfolded protein binding
Coordinates
chrA02:+:15590248..15590867
Molecular Weight (calculated)
17152.1 Da
IEP (calculated)
6.765
GRAVY (calculated)
-0.771
Length
151 amino acids
Sequence
(BLAST)
001: MTIALPIGGN VFSGLSGSKS SRRKNPKMLN RTRVVCSSSS IMDPYKTLKI RPDSSEYEVK QAFRQLAKKH HPDVCRGNNC GVQFQTINEA YNIVLKQIKN
101: QMEGTEEFQP FDVYDEGFNG MNDPDCDTWE EWMGWEGAGT RDYSSHVNPY A
Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)
001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
Arabidopsis Description
ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.