Factsheet for PGSC0003DMT400036852

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi, nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g117590.2.1	Tomato	plastid	82.72	83.23
PGSC0003DMT400073306	Potato	cytosol	66.05	66.05
KRH44579	Soybean	plastid	56.17	64.08
KRH47322	Soybean	plastid	60.49	62.82
VIT_09s0018g00620.t01	Wine grape	plastid	55.56	59.21
GSMUA_Achr1P10150_001	Banana	mitochondrion	48.15	56.93
CDY22291	Canola	plastid	51.23	54.97
AT1G80920.1	Thale cress	plastid	54.32	53.99
Bra008430.1-P	Field mustard	plastid	50.0	53.64
CDX79343	Canola	plastid	52.47	52.47
Bra003592.1-P	Field mustard	plastid	51.23	51.23
CDX67975	Canola	plastid	51.23	51.23
Bra035143.1-P	Field mustard	plastid	50.62	50.62
CDX87353	Canola	plastid	50.62	50.62
CDX88567	Canola	plastid	50.0	50.0
GSMUA_Achr7P05310_001	Banana	mitochondrion	45.06	48.03
GSMUA_AchrUn_...	Banana	plastid	47.53	45.83
TraesCSU01G098500.1	Wheat	plastid	29.63	31.79
TraesCS7B01G413400.1	Wheat	mitochondrion, plastid	26.54	30.5
TraesCS7D01G494800.1	Wheat	plastid	24.07	29.55
TraesCS7D01G495200.1	Wheat	plastid	27.78	29.41
TraesCS7B01G415000.1	Wheat	plastid	25.31	29.08
Zm00001d046813_P003	Maize	plastid	26.54	27.92
Zm00001d046812_P001	Maize	plastid	26.54	27.92
TraesCS7D01G494900.1	Wheat	plastid	25.31	27.89
Os06t0650900-02	Rice	plastid	24.07	27.46
EER90130	Sorghum	plastid	28.4	27.06
EES05389	Sorghum	plastid	25.31	26.8
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	16.67	26.73
TraesCS7D01G494100.1	Wheat	plastid	16.05	26.26
TraesCS7A01G506000.1	Wheat	plastid	25.31	26.11
TraesCS7D01G494000.1	Wheat	plastid	24.69	25.48
HORVU7Hr1G113530.1	Barley	plastid	24.07	24.53
HORVU7Hr1G113460.1	Barley	plastid	24.07	24.53
TraesCS7A01G506100.1	Wheat	plastid	22.84	24.03
TraesCS7A01G506700.1	Wheat	plastid	24.69	23.26
TraesCS7D01G495500.1	Wheat	plastid	27.16	15.33
TraesCS7B01G414800.1	Wheat	nucleus	26.54	14.53

Protein Annotations

EnsemblPlants:PGSC0003DMT400036852	EnsemblPlantsGene:PGSC0003DMG400014210	EntrezGene:102587221	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PGSC:PGSC0003DMG400014210	PRINTS:PR00625	RefSeq:XP_006341411.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000295F98F	UniProt:M1B4C5	MapMan:23.1.2.5	:	:	:

Description

DnaJ protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014210]

Coordinates

chr3:-:57285089..57286521

Molecular Weight (calculated)

18255.4 Da

IEP (calculated)

5.298

GRAVY (calculated)

-0.617

Length

162 amino acids

Sequence
(BLAST)

001: MATAMGMMGS IGGCGAASAS LFRLRNSAKK KTRNDKNGFR VSCVYSSSAV ADPYKTLKIQ PGASESEVRK AFRQLALKYH PDVCRGNNCG VQFHQINEAY
101: DVVMSNLRGE TRAELEMIEE YDDSNDESMR GMYEPDWDLW EEWMGWEGAG IRDYTSHVNP YI

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.